Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SNED1Q8TER0 AL512604.3-201ENST00000569583 964 ntBASIC23.83■■□□□ 1.4
SNED1Q8TER0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SNED1Q8TER0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 AC007375.3-201ENST00000600936 2314 ntBASIC23.82■■□□□ 1.4
SNED1Q8TER0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SNED1Q8TER0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SNED1Q8TER0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SNED1Q8TER0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SNED1Q8TER0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SNED1Q8TER0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
SNED1Q8TER0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.81■■□□□ 1.4
SNED1Q8TER0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNED1Q8TER0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SNED1Q8TER0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.81■■□□□ 1.4
SNED1Q8TER0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.81■■□□□ 1.4
SNED1Q8TER0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SNED1Q8TER0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNED1Q8TER0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNED1Q8TER0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
SNED1Q8TER0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.81■■□□□ 1.4
SNED1Q8TER0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.81■■□□□ 1.4
SNED1Q8TER0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.81■■□□□ 1.4
SNED1Q8TER0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SNED1Q8TER0 AC012313.10-201ENST00000623509 926 ntBASIC23.81■■□□□ 1.4
SNED1Q8TER0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SNED1Q8TER0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SNED1Q8TER0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.8■■□□□ 1.4
SNED1Q8TER0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.8■■□□□ 1.4
SNED1Q8TER0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC23.8■■□□□ 1.4
SNED1Q8TER0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.8■■□□□ 1.4
SNED1Q8TER0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNED1Q8TER0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNED1Q8TER0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SNED1Q8TER0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SNED1Q8TER0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNED1Q8TER0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SNED1Q8TER0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNED1Q8TER0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SNED1Q8TER0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SNED1Q8TER0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNED1Q8TER0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.79■■□□□ 1.4
SNED1Q8TER0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SNED1Q8TER0 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.79■■□□□ 1.4
SNED1Q8TER0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNED1Q8TER0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SNED1Q8TER0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.79■■□□□ 1.4
SNED1Q8TER0 AL160286.2-201ENST00000567150 934 ntBASIC23.79■■□□□ 1.4
SNED1Q8TER0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC23.79■■□□□ 1.4
SNED1Q8TER0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.79■■□□□ 1.4
SNED1Q8TER0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.79■■□□□ 1.4
SNED1Q8TER0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNED1Q8TER0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNED1Q8TER0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.79■■□□□ 1.4
SNED1Q8TER0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.79■■□□□ 1.4
SNED1Q8TER0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SNED1Q8TER0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNED1Q8TER0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SNED1Q8TER0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SNED1Q8TER0 AC092720.2-201ENST00000602388 1665 ntBASIC23.78■■□□□ 1.4
SNED1Q8TER0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNED1Q8TER0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNED1Q8TER0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNED1Q8TER0 SPDYE15P-201ENST00000424157 909 ntBASIC23.78■■□□□ 1.4
SNED1Q8TER0 ATP5G2P1-201ENST00000433580 426 ntBASIC23.78■■□□□ 1.4
SNED1Q8TER0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.78■■□□□ 1.4
SNED1Q8TER0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC23.78■■□□□ 1.4
SNED1Q8TER0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SNED1Q8TER0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SNED1Q8TER0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNED1Q8TER0 BX119927.1-201ENST00000636596 1552 ntBASIC23.78■■□□□ 1.4
SNED1Q8TER0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.78■■□□□ 1.4
SNED1Q8TER0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNED1Q8TER0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNED1Q8TER0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SNED1Q8TER0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.77■■□□□ 1.4
SNED1Q8TER0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 FXN-203ENST00000396366 922 ntTSL 2 BASIC23.77■■□□□ 1.4
SNED1Q8TER0 AC112907.2-201ENST00000448639 330 ntBASIC23.77■■□□□ 1.4
SNED1Q8TER0 VENTXP5-201ENST00000523979 775 ntBASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms