Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
BEST2Q8NFU1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21■□□□□ 0.95
BEST2Q8NFU1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21■□□□□ 0.95
BEST2Q8NFU1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
BEST2Q8NFU1 PPP1R14BP5-201ENST00000440334 435 ntBASIC21■□□□□ 0.95
BEST2Q8NFU1 TSPY15P-201ENST00000457163 923 ntBASIC21■□□□□ 0.95
BEST2Q8NFU1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21■□□□□ 0.95
BEST2Q8NFU1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
BEST2Q8NFU1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
BEST2Q8NFU1 AC131212.4-201ENST00000623606 975 ntBASIC21■□□□□ 0.95
BEST2Q8NFU1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
BEST2Q8NFU1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
BEST2Q8NFU1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21■□□□□ 0.95
BEST2Q8NFU1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
BEST2Q8NFU1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21■□□□□ 0.95
BEST2Q8NFU1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
BEST2Q8NFU1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
BEST2Q8NFU1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21■□□□□ 0.95
BEST2Q8NFU1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21■□□□□ 0.95
BEST2Q8NFU1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21■□□□□ 0.95
BEST2Q8NFU1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 AL355075.4-201ENST00000554988 638 ntBASIC20.99■□□□□ 0.95
BEST2Q8NFU1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.99■□□□□ 0.95
BEST2Q8NFU1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
BEST2Q8NFU1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 AC211429.1-201ENST00000415277 523 ntBASIC20.98■□□□□ 0.95
BEST2Q8NFU1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 AC026271.3-201ENST00000571884 352 ntBASIC20.98■□□□□ 0.95
BEST2Q8NFU1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BEST2Q8NFU1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 AC004980.1-204ENST00000429707 299 ntBASIC20.97■□□□□ 0.95
BEST2Q8NFU1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BEST2Q8NFU1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 REXO1L10P-201ENST00000615707 1290 ntBASIC20.96■□□□□ 0.95
BEST2Q8NFU1 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.96■□□□□ 0.95
BEST2Q8NFU1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BEST2Q8NFU1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms