Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDH20Q8N6Y1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDH20Q8N6Y1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
PCDH20Q8N6Y1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH20Q8N6Y1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH20Q8N6Y1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH20Q8N6Y1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH20Q8N6Y1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH20Q8N6Y1 AL691432.2-201ENST00000607222 2038 ntBASIC19.93■□□□□ 0.78
PCDH20Q8N6Y1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDH20Q8N6Y1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH20Q8N6Y1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH20Q8N6Y1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 AC099778.1-201ENST00000568593 1911 ntBASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 AF186192.3-201ENST00000583427 947 ntBASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PCDH20Q8N6Y1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 TUBB8P6-201ENST00000436895 1288 ntBASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 MIR4497-201ENST00000583208 89 ntBASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 AL353708.3-201ENST00000610272 989 ntBASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 AC009237.14-201ENST00000609975 1594 ntBASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH20Q8N6Y1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 C1QL1P1-201ENST00000568105 661 ntBASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 AC113410.3-201ENST00000623366 203 ntBASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDH20Q8N6Y1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.89■□□□□ 0.78
PCDH20Q8N6Y1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PCDH20Q8N6Y1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms