Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 CRYGFP-201ENST00000418459 633 ntBASIC21.77■■□□□ 1.08
TRIM50Q86XT4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 AC097488.1-201ENST00000507834 756 ntBASIC21.77■■□□□ 1.08
TRIM50Q86XT4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 DGCR10-201ENST00000609839 495 ntBASIC21.77■■□□□ 1.08
TRIM50Q86XT4 AC011298.2-201ENST00000617989 482 ntBASIC21.77■■□□□ 1.08
TRIM50Q86XT4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 KRT8P8-201ENST00000434750 1448 ntBASIC21.77■■□□□ 1.08
TRIM50Q86XT4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.77■■□□□ 1.07
TRIM50Q86XT4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 AC113347.1-201ENST00000413321 391 ntBASIC21.76■■□□□ 1.07
TRIM50Q86XT4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 AP005242.2-201ENST00000580065 1175 ntBASIC21.76■■□□□ 1.07
TRIM50Q86XT4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.76■■□□□ 1.07
TRIM50Q86XT4 GABARAPL3-202ENST00000624044 1851 ntBASIC21.76■■□□□ 1.07
TRIM50Q86XT4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM50Q86XT4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 AC130371.2-201ENST00000619443 611 ntBASIC21.75■■□□□ 1.07
TRIM50Q86XT4 AC092865.7-201ENST00000641832 219 ntBASIC21.75■■□□□ 1.07
TRIM50Q86XT4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 KRT18P22-201ENST00000402024 1347 ntBASIC21.75■■□□□ 1.07
TRIM50Q86XT4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM50Q86XT4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 TERF1P1-201ENST00000311003 1181 ntBASIC21.74■■□□□ 1.07
TRIM50Q86XT4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 SLC25A3P1-201ENST00000443844 931 ntBASIC21.74■■□□□ 1.07
TRIM50Q86XT4 Z85996.1-201ENST00000494644 937 ntBASIC21.74■■□□□ 1.07
TRIM50Q86XT4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 SLC25A1P4-201ENST00000567977 778 ntBASIC21.74■■□□□ 1.07
TRIM50Q86XT4 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.74■■□□□ 1.07
TRIM50Q86XT4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM50Q86XT4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 INGX-201ENST00000359239 846 ntBASIC21.73■■□□□ 1.07
TRIM50Q86XT4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM50Q86XT4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms