Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAPH1Q70E73 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAPH1Q70E73 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
RAPH1Q70E73 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAPH1Q70E73 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
RAPH1Q70E73 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAPH1Q70E73 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.57■□□□□ 0.72
RAPH1Q70E73 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.57■□□□□ 0.72
RAPH1Q70E73 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.57■□□□□ 0.72
RAPH1Q70E73 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RAPH1Q70E73 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.57■□□□□ 0.72
RAPH1Q70E73 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.57■□□□□ 0.72
RAPH1Q70E73 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 AC090340.1-201ENST00000620778 4980 ntBASIC19.57■□□□□ 0.72
RAPH1Q70E73 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.57■□□□□ 0.72
RAPH1Q70E73 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAPH1Q70E73 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAPH1Q70E73 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RAPH1Q70E73 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAPH1Q70E73 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAPH1Q70E73 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAPH1Q70E73 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.56■□□□□ 0.72
RAPH1Q70E73 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAPH1Q70E73 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RAPH1Q70E73 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAPH1Q70E73 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
RAPH1Q70E73 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RAPH1Q70E73 AC004911.1-201ENST00000416316 871 ntBASIC19.56■□□□□ 0.72
RAPH1Q70E73 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.56■□□□□ 0.72
RAPH1Q70E73 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.56■□□□□ 0.72
RAPH1Q70E73 AC022517.1-201ENST00000592429 346 ntBASIC19.56■□□□□ 0.72
RAPH1Q70E73 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RAPH1Q70E73 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.56■□□□□ 0.72
RAPH1Q70E73 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RAPH1Q70E73 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAPH1Q70E73 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAPH1Q70E73 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.56■□□□□ 0.72
RAPH1Q70E73 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.56■□□□□ 0.72
RAPH1Q70E73 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAPH1Q70E73 AL032819.2-201ENST00000624543 2162 ntBASIC19.56■□□□□ 0.72
RAPH1Q70E73 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAPH1Q70E73 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.55■□□□□ 0.72
RAPH1Q70E73 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAPH1Q70E73 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.55■□□□□ 0.72
RAPH1Q70E73 NEFHP1-201ENST00000412845 2629 ntBASIC19.55■□□□□ 0.72
RAPH1Q70E73 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.54■□□□□ 0.72
RAPH1Q70E73 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.54■□□□□ 0.72
RAPH1Q70E73 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAPH1Q70E73 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAPH1Q70E73 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAPH1Q70E73 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms