Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 POU5F1P3-201ENST00000428824 1078 ntBASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 AC133681.1-201ENST00000465482 601 ntBASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 MIR4651-201ENST00000582622 73 ntBASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 AL032819.2-201ENST00000624543 2162 ntBASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 AC006058.3-201ENST00000606217 1069 ntBASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 AC073648.6-201ENST00000641589 218 ntBASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.8■□□□□ 0.28
COLCA1Q6ZS62 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 AC104417.2-201ENST00000562989 1793 ntBASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
COLCA1Q6ZS62 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 AC128676.1-201ENST00000454392 318 ntBASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 C1QL1P1-201ENST00000568105 661 ntBASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 AC004264.1-201ENST00000608354 794 ntBASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 AC124016.1-201ENST00000609552 612 ntBASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 AL023875.1-201ENST00000640777 796 ntBASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COLCA1Q6ZS62 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COLCA1Q6ZS62 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms