Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AP006587.1-201ENST00000534129 1502 ntBASIC17.62■□□□□ 0.41
RTL6Q6ICC9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RTL6Q6ICC9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 RCN1P1-201ENST00000400413 996 ntBASIC17.61■□□□□ 0.41
RTL6Q6ICC9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 KRT8P9-201ENST00000558927 1449 ntBASIC17.61■□□□□ 0.41
RTL6Q6ICC9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 TFP1-202ENST00000475455 1573 ntBASIC17.61■□□□□ 0.41
RTL6Q6ICC9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.61■□□□□ 0.41
RTL6Q6ICC9 AC020907.5-201ENST00000624372 1936 ntBASIC17.6■□□□□ 0.41
RTL6Q6ICC9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 AC116562.2-201ENST00000507042 360 ntBASIC17.6■□□□□ 0.41
RTL6Q6ICC9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 AP000525.1-201ENST00000608286 694 ntBASIC17.6■□□□□ 0.41
RTL6Q6ICC9 AC010331.1-201ENST00000611423 582 ntBASIC17.6■□□□□ 0.41
RTL6Q6ICC9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 KRT16P1-201ENST00000399124 1418 ntBASIC17.6■□□□□ 0.41
RTL6Q6ICC9 KRT16P6-202ENST00000425692 1426 ntBASIC17.6■□□□□ 0.41
RTL6Q6ICC9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RTL6Q6ICC9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 AC018553.1-201ENST00000616682 1458 ntBASIC17.59■□□□□ 0.41
RTL6Q6ICC9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 UNC93B2-201ENST00000285383 730 ntBASIC17.59■□□□□ 0.41
RTL6Q6ICC9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
RTL6Q6ICC9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTL6Q6ICC9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTL6Q6ICC9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTL6Q6ICC9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.58■□□□□ 0.41
RTL6Q6ICC9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTL6Q6ICC9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RTL6Q6ICC9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTL6Q6ICC9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
RTL6Q6ICC9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 C1QL1P1-201ENST00000568105 661 ntBASIC17.58■□□□□ 0.4
RTL6Q6ICC9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.58■□□□□ 0.4
RTL6Q6ICC9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTL6Q6ICC9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTL6Q6ICC9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTL6Q6ICC9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTL6Q6ICC9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.57■□□□□ 0.4
RTL6Q6ICC9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTL6Q6ICC9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.57■□□□□ 0.4
RTL6Q6ICC9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RTL6Q6ICC9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTL6Q6ICC9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTL6Q6ICC9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.57■□□□□ 0.4
RTL6Q6ICC9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTL6Q6ICC9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms