Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CDC42BPAQ5VT25 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CDC42BPAQ5VT25 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC29.66■■■□□ 2.34
CDC42BPAQ5VT25 KRT8P11-201ENST00000409686 1436 ntBASIC29.66■■■□□ 2.34
CDC42BPAQ5VT25 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CDC42BPAQ5VT25 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 KRT8P45-201ENST00000414328 1447 ntBASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 SPDYE15P-201ENST00000424157 909 ntBASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 KRT18P48-201ENST00000434763 852 ntBASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 AC093458.2-201ENST00000623150 629 ntBASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CDC42BPAQ5VT25 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDC42BPAQ5VT25 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC29.64■■■□□ 2.34
CDC42BPAQ5VT25 IER3-202ENST00000376377 1350 ntBASIC29.64■■■□□ 2.34
CDC42BPAQ5VT25 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CDC42BPAQ5VT25 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC29.64■■■□□ 2.34
CDC42BPAQ5VT25 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDC42BPAQ5VT25 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDC42BPAQ5VT25 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC29.64■■■□□ 2.34
CDC42BPAQ5VT25 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDC42BPAQ5VT25 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC29.64■■■□□ 2.34
CDC42BPAQ5VT25 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDC42BPAQ5VT25 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
CDC42BPAQ5VT25 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
CDC42BPAQ5VT25 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
CDC42BPAQ5VT25 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 ILF2-202ENST00000368681 726 ntTSL 2 BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 SPDYE13P-201ENST00000445314 798 ntBASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDC42BPAQ5VT25 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 HCG4P8-203ENST00000443049 980 ntBASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 HOMER2P1-201ENST00000455653 964 ntBASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
CDC42BPAQ5VT25 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CDC42BPAQ5VT25 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC29.61■■■□□ 2.33
CDC42BPAQ5VT25 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CDC42BPAQ5VT25 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
CDC42BPAQ5VT25 DAP-202ENST00000432074 1048 ntTSL 2 BASIC29.61■■■□□ 2.33
CDC42BPAQ5VT25 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC29.61■■■□□ 2.33
CDC42BPAQ5VT25 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC29.61■■■□□ 2.33
CDC42BPAQ5VT25 AL512604.3-201ENST00000569583 964 ntBASIC29.61■■■□□ 2.33
CDC42BPAQ5VT25 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CDC42BPAQ5VT25 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC29.61■■■□□ 2.33
CDC42BPAQ5VT25 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC29.61■■■□□ 2.33
CDC42BPAQ5VT25 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CDC42BPAQ5VT25 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CDC42BPAQ5VT25 NEK4P2-201ENST00000580004 1012 ntBASIC29.6■■■□□ 2.33
CDC42BPAQ5VT25 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC29.6■■■□□ 2.33
CDC42BPAQ5VT25 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
CDC42BPAQ5VT25 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC29.6■■■□□ 2.33
CDC42BPAQ5VT25 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CDC42BPAQ5VT25 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC29.6■■■□□ 2.33
CDC42BPAQ5VT25 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
CDC42BPAQ5VT25 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
CDC42BPAQ5VT25 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC29.6■■■□□ 2.33
CDC42BPAQ5VT25 PRSS44-201ENST00000515154 1146 ntBASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
CDC42BPAQ5VT25 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC29.59■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms