Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 MED15P5-201ENST00000423150 992 ntBASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 SEC1P-202ENST00000473944 940 ntBASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 FICD-205ENST00000552758 603 ntTSL 2 BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 AL035252.4-201ENST00000624174 288 ntBASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 AC022494.1-201ENST00000466044 728 ntBASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL13A1Q5TAT6 AC116351.2-201ENST00000606540 1585 ntBASIC22.08■■□□□ 1.13
COL13A1Q5TAT6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL13A1Q5TAT6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC22.08■■□□□ 1.13
COL13A1Q5TAT6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC22.08■■□□□ 1.13
COL13A1Q5TAT6 AC005034.1-201ENST00000426657 489 ntBASIC22.08■■□□□ 1.13
COL13A1Q5TAT6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.08■■□□□ 1.13
COL13A1Q5TAT6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC22.08■■□□□ 1.13
COL13A1Q5TAT6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC22.08■■□□□ 1.13
COL13A1Q5TAT6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL13A1Q5TAT6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.08■■□□□ 1.12
COL13A1Q5TAT6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 AL645939.2-201ENST00000427340 991 ntBASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
COL13A1Q5TAT6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 AC010542.4-201ENST00000563151 1910 ntBASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 Z85996.1-201ENST00000494644 937 ntBASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 AC116407.3-201ENST00000623905 1129 ntBASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 AC104109.2-201ENST00000602919 1418 ntBASIC22.06■■□□□ 1.12
COL13A1Q5TAT6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.05■■□□□ 1.12
COL13A1Q5TAT6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL13A1Q5TAT6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL13A1Q5TAT6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.05■■□□□ 1.12
COL13A1Q5TAT6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL13A1Q5TAT6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC22.05■■□□□ 1.12
COL13A1Q5TAT6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC22.05■■□□□ 1.12
COL13A1Q5TAT6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms