Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.78■■□□□ 1.4
TTC39AQ5SRH9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.78■■□□□ 1.4
TTC39AQ5SRH9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.78■■□□□ 1.4
TTC39AQ5SRH9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.78■■□□□ 1.4
TTC39AQ5SRH9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TTC39AQ5SRH9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TTC39AQ5SRH9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
TTC39AQ5SRH9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TTC39AQ5SRH9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 TSPY15P-201ENST00000457163 923 ntBASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 AL355075.4-201ENST00000554988 638 ntBASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.77■■□□□ 1.4
TTC39AQ5SRH9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39AQ5SRH9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 AL031985.4-201ENST00000642138 673 ntBASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39AQ5SRH9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 AC004980.1-204ENST00000429707 299 ntBASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 REXO1L10P-201ENST00000615707 1290 ntBASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 REXO1L12P-201ENST00000622156 912 ntBASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 AC131212.4-201ENST00000623606 975 ntBASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.74■■□□□ 1.39
TTC39AQ5SRH9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39AQ5SRH9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39AQ5SRH9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39AQ5SRH9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39AQ5SRH9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
TTC39AQ5SRH9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39AQ5SRH9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39AQ5SRH9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39AQ5SRH9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39AQ5SRH9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.73■■□□□ 1.39
TTC39AQ5SRH9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39AQ5SRH9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
TTC39AQ5SRH9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.72■■□□□ 1.39
TTC39AQ5SRH9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms