Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 NBPF21P-201ENST00000425093 1451 ntBASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 TUBB8P6-201ENST00000436895 1288 ntBASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 AC073648.6-201ENST00000641589 218 ntBASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSL3PQ5NE16 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 AL023875.1-201ENST00000640777 796 ntBASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CTSL3PQ5NE16 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 AC006058.3-201ENST00000606217 1069 ntBASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSL3PQ5NE16 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSL3PQ5NE16 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms