Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 AC141586.3-201ENST00000562166 1838 ntBASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RUNDC3AQ59EK9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 TEX21P-204ENST00000641479 1693 ntBASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 AC093787.1-201ENST00000450396 207 ntBASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 AC120498.9-201ENST00000339021 3867 ntBASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RUNDC3AQ59EK9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 TFP1-202ENST00000475455 1573 ntBASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 AL049812.1-201ENST00000432563 2267 ntBASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RUNDC3AQ59EK9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RUNDC3AQ59EK9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.39■□□□□ 0.54
RUNDC3AQ59EK9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 AC006333.2-201ENST00000607957 2099 ntBASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 GPX1P1-201ENST00000388829 606 ntBASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RUNDC3AQ59EK9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms