Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.09■□□□□ 0.81
ALFQ53S48 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ALFQ53S48 AF186192.3-201ENST00000583427 947 ntBASIC20.09■□□□□ 0.81
ALFQ53S48 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALFQ53S48 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
ALFQ53S48 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALFQ53S48 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALFQ53S48 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALFQ53S48 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ALFQ53S48 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ALFQ53S48 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ALFQ53S48 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
ALFQ53S48 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ALFQ53S48 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ALFQ53S48 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.08■□□□□ 0.81
ALFQ53S48 AC012618.2-201ENST00000428058 849 ntBASIC20.08■□□□□ 0.81
ALFQ53S48 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.08■□□□□ 0.81
ALFQ53S48 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.08■□□□□ 0.81
ALFQ53S48 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ALFQ53S48 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ALFQ53S48 KRT8P8-201ENST00000434750 1448 ntBASIC20.08■□□□□ 0.8
ALFQ53S48 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
ALFQ53S48 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ALFQ53S48 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ALFQ53S48 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.08■□□□□ 0.8
ALFQ53S48 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ALFQ53S48 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.07■□□□□ 0.8
ALFQ53S48 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ALFQ53S48 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.07■□□□□ 0.8
ALFQ53S48 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.07■□□□□ 0.8
ALFQ53S48 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.07■□□□□ 0.8
ALFQ53S48 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ALFQ53S48 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.07■□□□□ 0.8
ALFQ53S48 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.07■□□□□ 0.8
ALFQ53S48 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALFQ53S48 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALFQ53S48 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALFQ53S48 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.06■□□□□ 0.8
ALFQ53S48 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.06■□□□□ 0.8
ALFQ53S48 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALFQ53S48 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.06■□□□□ 0.8
ALFQ53S48 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.06■□□□□ 0.8
ALFQ53S48 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALFQ53S48 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALFQ53S48 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ALFQ53S48 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ALFQ53S48 MIR718-201ENST00000390190 70 ntBASIC20.06■□□□□ 0.8
ALFQ53S48 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ALFQ53S48 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
ALFQ53S48 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.06■□□□□ 0.8
ALFQ53S48 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALFQ53S48 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.06■□□□□ 0.8
ALFQ53S48 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.06■□□□□ 0.8
ALFQ53S48 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.06■□□□□ 0.8
ALFQ53S48 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.06■□□□□ 0.8
ALFQ53S48 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.06■□□□□ 0.8
ALFQ53S48 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALFQ53S48 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.06■□□□□ 0.8
ALFQ53S48 AL135905.2-201ENST00000584934 1404 ntBASIC20.06■□□□□ 0.8
ALFQ53S48 AC113410.3-201ENST00000623366 203 ntBASIC20.06■□□□□ 0.8
ALFQ53S48 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALFQ53S48 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALFQ53S48 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
ALFQ53S48 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALFQ53S48 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.05■□□□□ 0.8
ALFQ53S48 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.05■□□□□ 0.8
ALFQ53S48 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ALFQ53S48 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALFQ53S48 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
ALFQ53S48 AL596275.1-201ENST00000423464 877 ntBASIC20.05■□□□□ 0.8
ALFQ53S48 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.05■□□□□ 0.8
ALFQ53S48 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.05■□□□□ 0.8
ALFQ53S48 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALFQ53S48 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.05■□□□□ 0.8
ALFQ53S48 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.05■□□□□ 0.8
ALFQ53S48 AL353708.3-201ENST00000610272 989 ntBASIC20.05■□□□□ 0.8
ALFQ53S48 AL049637.2-201ENST00000641778 930 ntBASIC20.05■□□□□ 0.8
ALFQ53S48 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.05■□□□□ 0.8
ALFQ53S48 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ALFQ53S48 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ALFQ53S48 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ALFQ53S48 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ALFQ53S48 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALFQ53S48 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms