Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC34.5■■■■□ 3.11
HMGXB3Q12766 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC34.5■■■■□ 3.11
HMGXB3Q12766 AC093525.10-201ENST00000625130 1569 ntBASIC34.5■■■■□ 3.11
HMGXB3Q12766 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC34.5■■■■□ 3.11
HMGXB3Q12766 KRT8P11-201ENST00000409686 1436 ntBASIC34.5■■■■□ 3.11
HMGXB3Q12766 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
HMGXB3Q12766 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC34.5■■■■□ 3.11
HMGXB3Q12766 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC34.5■■■■□ 3.11
HMGXB3Q12766 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
HMGXB3Q12766 RASA4DP-201ENST00000460726 1199 ntBASIC34.5■■■■□ 3.11
HMGXB3Q12766 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC34.5■■■■□ 3.11
HMGXB3Q12766 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC34.5■■■■□ 3.11
HMGXB3Q12766 TBCB-205ENST00000585746 875 ntTSL 3 BASIC34.5■■■■□ 3.11
HMGXB3Q12766 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
HMGXB3Q12766 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC34.5■■■■□ 3.11
HMGXB3Q12766 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC34.49■■■■□ 3.11
HMGXB3Q12766 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC34.49■■■■□ 3.11
HMGXB3Q12766 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
HMGXB3Q12766 AL121672.3-201ENST00000608644 468 ntBASIC34.49■■■■□ 3.11
HMGXB3Q12766 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC34.49■■■■□ 3.11
HMGXB3Q12766 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
HMGXB3Q12766 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
HMGXB3Q12766 ERF-202ENST00000440177 2032 ntTSL 2 BASIC34.49■■■■□ 3.11
HMGXB3Q12766 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
HMGXB3Q12766 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
HMGXB3Q12766 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC34.48■■■■□ 3.11
HMGXB3Q12766 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC34.48■■■■□ 3.11
HMGXB3Q12766 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
HMGXB3Q12766 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC34.48■■■■□ 3.11
HMGXB3Q12766 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
HMGXB3Q12766 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC34.48■■■■□ 3.11
HMGXB3Q12766 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC34.48■■■■□ 3.11
HMGXB3Q12766 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC34.48■■■■□ 3.11
HMGXB3Q12766 BX119927.1-201ENST00000636596 1552 ntBASIC34.48■■■■□ 3.11
HMGXB3Q12766 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC34.48■■■■□ 3.11
HMGXB3Q12766 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
HMGXB3Q12766 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
HMGXB3Q12766 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC34.47■■■■□ 3.11
HMGXB3Q12766 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC34.47■■■■□ 3.11
HMGXB3Q12766 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
HMGXB3Q12766 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC34.47■■■■□ 3.11
HMGXB3Q12766 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC34.47■■■■□ 3.11
HMGXB3Q12766 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC34.47■■■■□ 3.11
HMGXB3Q12766 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
HMGXB3Q12766 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC34.46■■■■□ 3.11
HMGXB3Q12766 AL732292.2-201ENST00000609649 430 ntBASIC34.46■■■■□ 3.11
HMGXB3Q12766 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC34.46■■■■□ 3.11
HMGXB3Q12766 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC34.46■■■■□ 3.11
HMGXB3Q12766 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC34.46■■■■□ 3.11
HMGXB3Q12766 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
HMGXB3Q12766 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
HMGXB3Q12766 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC34.45■■■■□ 3.11
HMGXB3Q12766 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
HMGXB3Q12766 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
HMGXB3Q12766 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.11
HMGXB3Q12766 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
HMGXB3Q12766 AC092597.1-201ENST00000487352 616 ntBASIC34.45■■■■□ 3.1
HMGXB3Q12766 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC34.45■■■■□ 3.1
HMGXB3Q12766 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC34.45■■■■□ 3.1
HMGXB3Q12766 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC34.44■■■■□ 3.1
HMGXB3Q12766 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
HMGXB3Q12766 PLK5-205ENST00000642079 1969 ntBASIC34.44■■■■□ 3.1
HMGXB3Q12766 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
HMGXB3Q12766 NUS1P1-201ENST00000446295 882 ntBASIC34.44■■■■□ 3.1
HMGXB3Q12766 EMBP1-201ENST00000458200 901 ntBASIC34.44■■■■□ 3.1
HMGXB3Q12766 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
HMGXB3Q12766 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC34.44■■■■□ 3.1
HMGXB3Q12766 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC34.43■■■■□ 3.1
HMGXB3Q12766 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
HMGXB3Q12766 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
HMGXB3Q12766 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
HMGXB3Q12766 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
HMGXB3Q12766 TSPY19P-201ENST00000418461 509 ntBASIC34.43■■■■□ 3.1
HMGXB3Q12766 TSPY18P-201ENST00000441642 509 ntBASIC34.43■■■■□ 3.1
HMGXB3Q12766 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC34.43■■■■□ 3.1
HMGXB3Q12766 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC34.43■■■■□ 3.1
HMGXB3Q12766 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC34.43■■■■□ 3.1
HMGXB3Q12766 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
HMGXB3Q12766 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC34.42■■■■□ 3.1
HMGXB3Q12766 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC34.42■■■■□ 3.1
HMGXB3Q12766 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
HMGXB3Q12766 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
HMGXB3Q12766 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
HMGXB3Q12766 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC34.42■■■■□ 3.1
HMGXB3Q12766 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
HMGXB3Q12766 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC34.42■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms