Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.14□□□□□ -0.47
HSPG2P98160 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.14□□□□□ -0.47
HSPG2P98160 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.14□□□□□ -0.47
HSPG2P98160 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.14□□□□□ -0.47
HSPG2P98160 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.14□□□□□ -0.47
HSPG2P98160 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC12.14□□□□□ -0.47
HSPG2P98160 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 CD37-204ENST00000535669 1674 ntTSL 2 BASIC12.14□□□□□ -0.47
HSPG2P98160 MIR564-202ENST00000385049 94 ntBASIC12.14□□□□□ -0.47
HSPG2P98160 AL590627.1-203ENST00000421194 1026 ntBASIC12.14□□□□□ -0.47
HSPG2P98160 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 KRT8P41-201ENST00000533985 1514 ntBASIC12.14□□□□□ -0.47
HSPG2P98160 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
HSPG2P98160 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC12.14□□□□□ -0.47
HSPG2P98160 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
HSPG2P98160 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.14□□□□□ -0.47
HSPG2P98160 AL121672.3-201ENST00000608644 468 ntBASIC12.14□□□□□ -0.47
HSPG2P98160 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HSPG2P98160 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
HSPG2P98160 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.14□□□□□ -0.47
HSPG2P98160 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.14□□□□□ -0.47
HSPG2P98160 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HSPG2P98160 AP000867.3-201ENST00000524675 377 ntBASIC12.14□□□□□ -0.47
HSPG2P98160 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
HSPG2P98160 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HSPG2P98160 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.13□□□□□ -0.47
HSPG2P98160 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC12.13□□□□□ -0.47
HSPG2P98160 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
HSPG2P98160 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC12.13□□□□□ -0.47
HSPG2P98160 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.13□□□□□ -0.47
HSPG2P98160 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC12.13□□□□□ -0.47
HSPG2P98160 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.13□□□□□ -0.47
HSPG2P98160 PMS2P2-201ENST00000425039 1128 ntBASIC12.13□□□□□ -0.47
HSPG2P98160 CA15P1-201ENST00000481698 905 ntBASIC12.13□□□□□ -0.47
HSPG2P98160 AL121912.1-201ENST00000603683 238 ntBASIC12.13□□□□□ -0.47
HSPG2P98160 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.13□□□□□ -0.47
HSPG2P98160 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC12.13□□□□□ -0.47
HSPG2P98160 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.13□□□□□ -0.47
HSPG2P98160 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.13□□□□□ -0.47
HSPG2P98160 TUBB8P6-201ENST00000436895 1288 ntBASIC12.13□□□□□ -0.47
HSPG2P98160 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HSPG2P98160 AC242852.2-201ENST00000615738 1807 ntBASIC12.12□□□□□ -0.47
HSPG2P98160 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
HSPG2P98160 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.12□□□□□ -0.47
HSPG2P98160 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HSPG2P98160 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.12□□□□□ -0.47
HSPG2P98160 GOLGA2P6-201ENST00000340929 2049 ntBASIC12.12□□□□□ -0.47
HSPG2P98160 KRT8P17-201ENST00000453110 1448 ntBASIC12.12□□□□□ -0.47
HSPG2P98160 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HSPG2P98160 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HSPG2P98160 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HSPG2P98160 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
HSPG2P98160 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HSPG2P98160 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HSPG2P98160 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.12□□□□□ -0.47
HSPG2P98160 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.12□□□□□ -0.47
HSPG2P98160 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.12□□□□□ -0.47
HSPG2P98160 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HSPG2P98160 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
HSPG2P98160 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HSPG2P98160 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.12□□□□□ -0.47
HSPG2P98160 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HSPG2P98160 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HSPG2P98160 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.12□□□□□ -0.47
HSPG2P98160 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.12□□□□□ -0.47
HSPG2P98160 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC12.12□□□□□ -0.47
HSPG2P98160 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HSPG2P98160 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
HSPG2P98160 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.11□□□□□ -0.47
HSPG2P98160 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms