Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.33■■□□□ 1.33
CNTNAP1P78357 AC079834.2-201ENST00000609776 1949 ntBASIC23.33■■□□□ 1.33
CNTNAP1P78357 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CNTNAP1P78357 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CNTNAP1P78357 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.33■■□□□ 1.33
CNTNAP1P78357 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.33■■□□□ 1.33
CNTNAP1P78357 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.33■■□□□ 1.33
CNTNAP1P78357 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.33■■□□□ 1.33
CNTNAP1P78357 NPAP1P7-201ENST00000613027 823 ntBASIC23.33■■□□□ 1.33
CNTNAP1P78357 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CNTNAP1P78357 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.32■■□□□ 1.32
CNTNAP1P78357 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC23.32■■□□□ 1.32
CNTNAP1P78357 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CNTNAP1P78357 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 AL023973.1-201ENST00000624619 620 ntBASIC23.32■■□□□ 1.32
CNTNAP1P78357 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.32■■□□□ 1.32
CNTNAP1P78357 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.32■■□□□ 1.32
CNTNAP1P78357 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP1P78357 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP1P78357 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP1P78357 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP1P78357 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP1P78357 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP1P78357 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
CNTNAP1P78357 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.31■■□□□ 1.32
CNTNAP1P78357 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.31■■□□□ 1.32
CNTNAP1P78357 CKBP1-201ENST00000565489 1086 ntBASIC23.31■■□□□ 1.32
CNTNAP1P78357 MIR3652-201ENST00000579335 131 ntBASIC23.31■■□□□ 1.32
CNTNAP1P78357 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC23.31■■□□□ 1.32
CNTNAP1P78357 AC083849.1-201ENST00000615227 514 ntBASIC23.31■■□□□ 1.32
CNTNAP1P78357 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CNTNAP1P78357 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP1P78357 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.31■■□□□ 1.32
CNTNAP1P78357 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP1P78357 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
CNTNAP1P78357 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CNTNAP1P78357 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNTNAP1P78357 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNTNAP1P78357 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.3■■□□□ 1.32
CNTNAP1P78357 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.3■■□□□ 1.32
CNTNAP1P78357 AC011298.2-201ENST00000617989 482 ntBASIC23.3■■□□□ 1.32
CNTNAP1P78357 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CNTNAP1P78357 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.3■■□□□ 1.32
CNTNAP1P78357 SMG8-203ENST00000578922 2178 ntBASIC23.3■■□□□ 1.32
CNTNAP1P78357 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CNTNAP1P78357 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.3■■□□□ 1.32
CNTNAP1P78357 AC092338.2-201ENST00000568827 1415 ntBASIC23.3■■□□□ 1.32
CNTNAP1P78357 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNTNAP1P78357 MFAP1P1-201ENST00000442257 1255 ntBASIC23.29■■□□□ 1.32
CNTNAP1P78357 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.29■■□□□ 1.32
CNTNAP1P78357 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.29■■□□□ 1.32
CNTNAP1P78357 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNTNAP1P78357 AC139530.3-201ENST00000620344 690 ntBASIC23.29■■□□□ 1.32
CNTNAP1P78357 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.29■■□□□ 1.32
CNTNAP1P78357 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNTNAP1P78357 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CNTNAP1P78357 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.29■■□□□ 1.32
CNTNAP1P78357 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.29■■□□□ 1.32
CNTNAP1P78357 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CNTNAP1P78357 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CNTNAP1P78357 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
CNTNAP1P78357 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CNTNAP1P78357 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.28■■□□□ 1.32
CNTNAP1P78357 AC009078.2-202ENST00000463353 338 ntBASIC23.28■■□□□ 1.32
CNTNAP1P78357 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.28■■□□□ 1.32
CNTNAP1P78357 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CNTNAP1P78357 AC092119.3-201ENST00000612618 583 ntBASIC23.28■■□□□ 1.32
CNTNAP1P78357 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CNTNAP1P78357 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CNTNAP1P78357 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CNTNAP1P78357 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.28■■□□□ 1.32
CNTNAP1P78357 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNTNAP1P78357 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.28■■□□□ 1.32
CNTNAP1P78357 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.28■■□□□ 1.32
CNTNAP1P78357 AC096733.2-201ENST00000609937 1394 ntBASIC23.28■■□□□ 1.32
CNTNAP1P78357 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNTNAP1P78357 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CNTNAP1P78357 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.27■■□□□ 1.32
CNTNAP1P78357 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNTNAP1P78357 UNC93B7-201ENST00000509439 705 ntBASIC23.27■■□□□ 1.32
CNTNAP1P78357 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.27■■□□□ 1.32
CNTNAP1P78357 ZNF444P1-201ENST00000559497 298 ntBASIC23.27■■□□□ 1.32
CNTNAP1P78357 AL512604.3-201ENST00000569583 964 ntBASIC23.27■■□□□ 1.32
CNTNAP1P78357 AC140113.3-201ENST00000605663 199 ntBASIC23.27■■□□□ 1.32
CNTNAP1P78357 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNTNAP1P78357 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms