Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
AP1S1P61966 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S1P61966 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S1P61966 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S1P61966 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S1P61966 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.67■□□□□ 0.74
AP1S1P61966 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.67■□□□□ 0.74
AP1S1P61966 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
AP1S1P61966 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S1P61966 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S1P61966 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.67■□□□□ 0.74
AP1S1P61966 KSR1P1-201ENST00000446298 240 ntBASIC19.67■□□□□ 0.74
AP1S1P61966 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.67■□□□□ 0.74
AP1S1P61966 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S1P61966 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S1P61966 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
AP1S1P61966 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S1P61966 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S1P61966 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.67■□□□□ 0.74
AP1S1P61966 AC125437.2-201ENST00000625180 2167 ntBASIC19.67■□□□□ 0.74
AP1S1P61966 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S1P61966 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S1P61966 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.67■□□□□ 0.74
AP1S1P61966 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
AP1S1P61966 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
AP1S1P61966 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S1P61966 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.66■□□□□ 0.74
AP1S1P61966 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.66■□□□□ 0.74
AP1S1P61966 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.66■□□□□ 0.74
AP1S1P61966 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S1P61966 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.66■□□□□ 0.74
AP1S1P61966 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S1P61966 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S1P61966 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S1P61966 TREX1-205ENST00000625293 1783 ntBASIC19.66■□□□□ 0.74
AP1S1P61966 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S1P61966 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S1P61966 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.66■□□□□ 0.74
AP1S1P61966 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.66■□□□□ 0.74
AP1S1P61966 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.66■□□□□ 0.74
AP1S1P61966 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S1P61966 RPS2P4-201ENST00000476944 856 ntBASIC19.66■□□□□ 0.74
AP1S1P61966 AC093827.2-201ENST00000512654 315 ntBASIC19.66■□□□□ 0.74
AP1S1P61966 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.66■□□□□ 0.74
AP1S1P61966 AL445675.2-201ENST00000620291 557 ntBASIC19.66■□□□□ 0.74
AP1S1P61966 HLA-A-209ENST00000638375 975 ntBASIC19.66■□□□□ 0.74
AP1S1P61966 AL049637.2-201ENST00000641778 930 ntBASIC19.66■□□□□ 0.74
AP1S1P61966 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
AP1S1P61966 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S1P61966 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.66■□□□□ 0.74
AP1S1P61966 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.66■□□□□ 0.74
AP1S1P61966 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S1P61966 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S1P61966 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
AP1S1P61966 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
AP1S1P61966 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.65■□□□□ 0.74
AP1S1P61966 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.65■□□□□ 0.74
AP1S1P61966 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.65■□□□□ 0.74
AP1S1P61966 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.65■□□□□ 0.74
AP1S1P61966 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.65■□□□□ 0.74
AP1S1P61966 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S1P61966 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.64■□□□□ 0.74
AP1S1P61966 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.64■□□□□ 0.74
AP1S1P61966 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.64■□□□□ 0.74
AP1S1P61966 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP1S1P61966 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP1S1P61966 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.64■□□□□ 0.73
AP1S1P61966 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP1S1P61966 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.64■□□□□ 0.73
AP1S1P61966 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.64■□□□□ 0.73
AP1S1P61966 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.64■□□□□ 0.73
AP1S1P61966 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.64■□□□□ 0.73
AP1S1P61966 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
AP1S1P61966 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.64■□□□□ 0.73
AP1S1P61966 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP1S1P61966 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.64■□□□□ 0.73
AP1S1P61966 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AP1S1P61966 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP1S1P61966 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP1S1P61966 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.64■□□□□ 0.73
AP1S1P61966 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.64■□□□□ 0.73
AP1S1P61966 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP1S1P61966 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP1S1P61966 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP1S1P61966 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms