Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLDN2P57739 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN2P57739 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN2P57739 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN2P57739 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN2P57739 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN2P57739 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLDN2P57739 LINC01465-201ENST00000408887 1940 ntBASIC19.29■□□□□ 0.68
CLDN2P57739 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.28■□□□□ 0.68
CLDN2P57739 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN2P57739 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN2P57739 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CLDN2P57739 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN2P57739 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN2P57739 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN2P57739 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLDN2P57739 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN2P57739 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN2P57739 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN2P57739 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.28■□□□□ 0.68
CLDN2P57739 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN2P57739 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLDN2P57739 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN2P57739 DGCR10-201ENST00000609839 495 ntBASIC19.28■□□□□ 0.68
CLDN2P57739 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CLDN2P57739 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN2P57739 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN2P57739 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN2P57739 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN2P57739 GABARAPL3-202ENST00000624044 1851 ntBASIC19.28■□□□□ 0.68
CLDN2P57739 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN2P57739 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN2P57739 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN2P57739 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN2P57739 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN2P57739 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CLDN2P57739 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLDN2P57739 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN2P57739 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN2P57739 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN2P57739 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN2P57739 AC113347.1-201ENST00000413321 391 ntBASIC19.27■□□□□ 0.68
CLDN2P57739 AC004951.3-201ENST00000418645 1148 ntBASIC19.27■□□□□ 0.68
CLDN2P57739 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN2P57739 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN2P57739 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLDN2P57739 AP005242.2-201ENST00000580065 1175 ntBASIC19.27■□□□□ 0.68
CLDN2P57739 AC092865.7-201ENST00000641832 219 ntBASIC19.27■□□□□ 0.68
CLDN2P57739 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLDN2P57739 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN2P57739 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CLDN2P57739 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN2P57739 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN2P57739 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN2P57739 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLDN2P57739 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLDN2P57739 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.26■□□□□ 0.67
CLDN2P57739 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLDN2P57739 AP000692.2-201ENST00000608391 879 ntBASIC19.26■□□□□ 0.67
CLDN2P57739 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN2P57739 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN2P57739 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN2P57739 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN2P57739 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.26■□□□□ 0.67
CLDN2P57739 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN2P57739 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN2P57739 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLDN2P57739 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CLDN2P57739 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN2P57739 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLDN2P57739 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN2P57739 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN2P57739 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLDN2P57739 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN2P57739 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN2P57739 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN2P57739 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN2P57739 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN2P57739 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLDN2P57739 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN2P57739 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CLDN2P57739 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN2P57739 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN2P57739 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN2P57739 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN2P57739 SLC25A3P1-201ENST00000443844 931 ntBASIC19.25■□□□□ 0.67
CLDN2P57739 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.25■□□□□ 0.67
CLDN2P57739 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN2P57739 C2orf69P3-201ENST00000565542 1120 ntBASIC19.25■□□□□ 0.67
CLDN2P57739 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN2P57739 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN2P57739 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLDN2P57739 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN2P57739 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CLDN2P57739 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLDN2P57739 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN2P57739 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLDN2P57739 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN2P57739 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN2P57739 TERF1P1-201ENST00000311003 1181 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms