Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXG1P55316 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.14■□□□□ 0.33
FOXG1P55316 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXG1P55316 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXG1P55316 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.14■□□□□ 0.33
FOXG1P55316 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXG1P55316 AL135905.2-201ENST00000584934 1404 ntBASIC17.13■□□□□ 0.33
FOXG1P55316 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
FOXG1P55316 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXG1P55316 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 NIFKP9-201ENST00000419265 221 ntBASIC17.13■□□□□ 0.33
FOXG1P55316 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 MIR4497-201ENST00000583208 89 ntBASIC17.13■□□□□ 0.33
FOXG1P55316 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.13■□□□□ 0.33
FOXG1P55316 HLA-A-209ENST00000638375 975 ntBASIC17.13■□□□□ 0.33
FOXG1P55316 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
FOXG1P55316 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
FOXG1P55316 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXG1P55316 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXG1P55316 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXG1P55316 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXG1P55316 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FOXG1P55316 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXG1P55316 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXG1P55316 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
FOXG1P55316 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXG1P55316 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXG1P55316 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
FOXG1P55316 TSPY15P-201ENST00000457163 923 ntBASIC17.12■□□□□ 0.33
FOXG1P55316 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXG1P55316 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXG1P55316 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
FOXG1P55316 CD177P1-201ENST00000606252 935 ntBASIC17.12■□□□□ 0.33
FOXG1P55316 AC073195.1-201ENST00000607241 877 ntBASIC17.12■□□□□ 0.33
FOXG1P55316 AL353708.3-201ENST00000610272 989 ntBASIC17.12■□□□□ 0.33
FOXG1P55316 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXG1P55316 CR392000.1-201ENST00000624770 1228 ntBASIC17.12■□□□□ 0.33
FOXG1P55316 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXG1P55316 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
FOXG1P55316 TREX1-205ENST00000625293 1783 ntBASIC17.12■□□□□ 0.33
FOXG1P55316 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
FOXG1P55316 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXG1P55316 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
FOXG1P55316 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXG1P55316 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXG1P55316 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXG1P55316 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXG1P55316 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXG1P55316 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXG1P55316 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FOXG1P55316 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FOXG1P55316 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FOXG1P55316 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXG1P55316 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXG1P55316 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXG1P55316 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXG1P55316 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
FOXG1P55316 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXG1P55316 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
FOXG1P55316 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXG1P55316 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXG1P55316 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FOXG1P55316 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXG1P55316 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXG1P55316 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXG1P55316 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXG1P55316 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXG1P55316 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXG1P55316 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXG1P55316 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXG1P55316 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXG1P55316 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXG1P55316 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXG1P55316 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms