Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB3P54753 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB3P54753 AC073508.3-201ENST00000619697 1419 ntBASIC20.39■□□□□ 0.85
EPHB3P54753 AC096733.2-201ENST00000609937 1394 ntBASIC20.39■□□□□ 0.85
EPHB3P54753 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.39■□□□□ 0.85
EPHB3P54753 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB3P54753 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB3P54753 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.39■□□□□ 0.85
EPHB3P54753 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.39■□□□□ 0.85
EPHB3P54753 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.39■□□□□ 0.85
EPHB3P54753 AL445228.2-201ENST00000605589 952 ntBASIC20.39■□□□□ 0.85
EPHB3P54753 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB3P54753 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB3P54753 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB3P54753 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.39■□□□□ 0.85
EPHB3P54753 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
EPHB3P54753 GABARAPL3-202ENST00000624044 1851 ntBASIC20.39■□□□□ 0.85
EPHB3P54753 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB3P54753 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.38■□□□□ 0.85
EPHB3P54753 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.38■□□□□ 0.85
EPHB3P54753 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHB3P54753 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHB3P54753 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
EPHB3P54753 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHB3P54753 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
EPHB3P54753 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHB3P54753 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHB3P54753 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHB3P54753 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.38■□□□□ 0.85
EPHB3P54753 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.38■□□□□ 0.85
EPHB3P54753 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHB3P54753 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
EPHB3P54753 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.38■□□□□ 0.85
EPHB3P54753 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.38■□□□□ 0.85
EPHB3P54753 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHB3P54753 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
EPHB3P54753 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.38■□□□□ 0.85
EPHB3P54753 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.38■□□□□ 0.85
EPHB3P54753 AL162377.1-201ENST00000618844 1793 ntBASIC20.38■□□□□ 0.85
EPHB3P54753 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
EPHB3P54753 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
EPHB3P54753 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
EPHB3P54753 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
EPHB3P54753 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
EPHB3P54753 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EPHB3P54753 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHB3P54753 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHB3P54753 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHB3P54753 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
EPHB3P54753 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
EPHB3P54753 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.37■□□□□ 0.85
EPHB3P54753 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
EPHB3P54753 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EPHB3P54753 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHB3P54753 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHB3P54753 ARMC10P1-201ENST00000313754 855 ntBASIC20.37■□□□□ 0.85
EPHB3P54753 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHB3P54753 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EPHB3P54753 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
EPHB3P54753 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.37■□□□□ 0.85
EPHB3P54753 CCR12P-201ENST00000446203 998 ntBASIC20.37■□□□□ 0.85
EPHB3P54753 AC010203.1-204ENST00000548782 407 ntBASIC20.37■□□□□ 0.85
EPHB3P54753 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.37■□□□□ 0.85
EPHB3P54753 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.37■□□□□ 0.85
EPHB3P54753 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
EPHB3P54753 AC116562.4-202ENST00000641738 218 ntBASIC20.37■□□□□ 0.85
EPHB3P54753 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EPHB3P54753 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHB3P54753 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
EPHB3P54753 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EPHB3P54753 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHB3P54753 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EPHB3P54753 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.36■□□□□ 0.85
EPHB3P54753 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
EPHB3P54753 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EPHB3P54753 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHB3P54753 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.36■□□□□ 0.85
EPHB3P54753 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.36■□□□□ 0.85
EPHB3P54753 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.36■□□□□ 0.85
EPHB3P54753 KRT18P35-201ENST00000510488 1269 ntBASIC20.36■□□□□ 0.85
EPHB3P54753 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.36■□□□□ 0.85
EPHB3P54753 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.36■□□□□ 0.85
EPHB3P54753 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EPHB3P54753 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHB3P54753 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.36■□□□□ 0.85
EPHB3P54753 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
EPHB3P54753 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHB3P54753 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.35■□□□□ 0.85
EPHB3P54753 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHB3P54753 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHB3P54753 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHB3P54753 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.35■□□□□ 0.85
EPHB3P54753 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHB3P54753 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.35■□□□□ 0.85
EPHB3P54753 SLC25A1P2-201ENST00000430693 912 ntBASIC20.35■□□□□ 0.85
EPHB3P54753 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHB3P54753 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EPHB3P54753 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.35■□□□□ 0.85
EPHB3P54753 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.35■□□□□ 0.85
EPHB3P54753 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms