Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP1B3P54709 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
ATP1B3P54709 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.9■□□□□ 0.3
ATP1B3P54709 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP1B3P54709 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ATP1B3P54709 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP1B3P54709 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP1B3P54709 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ATP1B3P54709 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP1B3P54709 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ATP1B3P54709 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP1B3P54709 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP1B3P54709 AC105036.2-201ENST00000569468 176 ntBASIC16.9■□□□□ 0.3
ATP1B3P54709 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP1B3P54709 AL137784.2-201ENST00000607332 1000 ntBASIC16.9■□□□□ 0.3
ATP1B3P54709 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP1B3P54709 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP1B3P54709 AC073111.5-205ENST00000641717 521 ntBASIC16.9■□□□□ 0.3
ATP1B3P54709 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP1B3P54709 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP1B3P54709 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP1B3P54709 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP1B3P54709 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP1B3P54709 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP1B3P54709 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP1B3P54709 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP1B3P54709 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP1B3P54709 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATP1B3P54709 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP1B3P54709 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP1B3P54709 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP1B3P54709 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
ATP1B3P54709 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP1B3P54709 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP1B3P54709 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ATP1B3P54709 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP1B3P54709 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP1B3P54709 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP1B3P54709 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.89■□□□□ 0.29
ATP1B3P54709 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP1B3P54709 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP1B3P54709 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP1B3P54709 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
ATP1B3P54709 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP1B3P54709 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP1B3P54709 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP1B3P54709 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP1B3P54709 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP1B3P54709 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ATP1B3P54709 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
ATP1B3P54709 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
ATP1B3P54709 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ATP1B3P54709 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ATP1B3P54709 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP1B3P54709 BCL2-203ENST00000589955 5011 ntBASIC16.88■□□□□ 0.29
ATP1B3P54709 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
ATP1B3P54709 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP1B3P54709 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP1B3P54709 AC026185.1-201ENST00000445748 174 ntBASIC16.88■□□□□ 0.29
ATP1B3P54709 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.88■□□□□ 0.29
ATP1B3P54709 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP1B3P54709 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP1B3P54709 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP1B3P54709 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ATP1B3P54709 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ATP1B3P54709 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ATP1B3P54709 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ATP1B3P54709 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP1B3P54709 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP1B3P54709 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 AC093484.2-201ENST00000580996 2166 ntBASIC16.87■□□□□ 0.29
ATP1B3P54709 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP1B3P54709 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP1B3P54709 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP1B3P54709 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 GPX1P1-201ENST00000388829 606 ntBASIC16.87■□□□□ 0.29
ATP1B3P54709 BX276092.2-201ENST00000417668 665 ntBASIC16.87■□□□□ 0.29
ATP1B3P54709 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP1B3P54709 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP1B3P54709 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ATP1B3P54709 AC092437.1-201ENST00000624794 1048 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms