Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITGA8P53708 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.01■□□□□ 0.79
ITGA8P53708 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITGA8P53708 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
ITGA8P53708 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITGA8P53708 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITGA8P53708 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.01■□□□□ 0.79
ITGA8P53708 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.01■□□□□ 0.79
ITGA8P53708 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.01■□□□□ 0.79
ITGA8P53708 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
ITGA8P53708 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ITGA8P53708 TEX21P-204ENST00000641479 1693 ntBASIC20■□□□□ 0.79
ITGA8P53708 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITGA8P53708 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20■□□□□ 0.79
ITGA8P53708 AC116351.2-201ENST00000606540 1585 ntBASIC20■□□□□ 0.79
ITGA8P53708 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20■□□□□ 0.79
ITGA8P53708 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20■□□□□ 0.79
ITGA8P53708 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITGA8P53708 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ITGA8P53708 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITGA8P53708 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITGA8P53708 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ITGA8P53708 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITGA8P53708 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20■□□□□ 0.79
ITGA8P53708 OR10C1-204ENST00000622521 1039 ntBASIC20■□□□□ 0.79
ITGA8P53708 AC231657.2-201ENST00000624556 255 ntBASIC20■□□□□ 0.79
ITGA8P53708 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ITGA8P53708 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20■□□□□ 0.79
ITGA8P53708 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ITGA8P53708 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20■□□□□ 0.79
ITGA8P53708 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITGA8P53708 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITGA8P53708 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ITGA8P53708 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ITGA8P53708 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20■□□□□ 0.79
ITGA8P53708 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.99■□□□□ 0.79
ITGA8P53708 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITGA8P53708 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ITGA8P53708 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGA8P53708 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.99■□□□□ 0.79
ITGA8P53708 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ITGA8P53708 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.99■□□□□ 0.79
ITGA8P53708 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGA8P53708 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGA8P53708 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGA8P53708 AC007322.1-201ENST00000426983 750 ntBASIC19.99■□□□□ 0.79
ITGA8P53708 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ITGA8P53708 AC093787.1-201ENST00000450396 207 ntBASIC19.99■□□□□ 0.79
ITGA8P53708 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.99■□□□□ 0.79
ITGA8P53708 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.99■□□□□ 0.79
ITGA8P53708 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.99■□□□□ 0.79
ITGA8P53708 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGA8P53708 BID-214ENST00000617586 542 ntTSL 5 BASIC19.99■□□□□ 0.79
ITGA8P53708 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ITGA8P53708 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGA8P53708 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGA8P53708 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGA8P53708 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ITGA8P53708 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITGA8P53708 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ITGA8P53708 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGA8P53708 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITGA8P53708 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ITGA8P53708 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITGA8P53708 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ITGA8P53708 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITGA8P53708 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.98■□□□□ 0.79
ITGA8P53708 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ITGA8P53708 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITGA8P53708 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.98■□□□□ 0.79
ITGA8P53708 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ITGA8P53708 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.98■□□□□ 0.79
ITGA8P53708 AC141586.3-201ENST00000562166 1838 ntBASIC19.98■□□□□ 0.79
ITGA8P53708 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITGA8P53708 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ITGA8P53708 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ITGA8P53708 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.98■□□□□ 0.79
ITGA8P53708 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.98■□□□□ 0.79
ITGA8P53708 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ITGA8P53708 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ITGA8P53708 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITGA8P53708 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ITGA8P53708 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ITGA8P53708 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.98■□□□□ 0.79
ITGA8P53708 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
ITGA8P53708 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITGA8P53708 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITGA8P53708 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ITGA8P53708 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
ITGA8P53708 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITGA8P53708 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITGA8P53708 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITGA8P53708 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITGA8P53708 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITGA8P53708 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ITGA8P53708 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
ITGA8P53708 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ITGA8P53708 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITGA8P53708 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ITGA8P53708 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms