Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIMK2P53671 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIMK2P53671 RNF165-205ENST00000588679 2904 ntBASIC19.65■□□□□ 0.74
LIMK2P53671 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.65■□□□□ 0.74
LIMK2P53671 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIMK2P53671 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIMK2P53671 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIMK2P53671 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.65■□□□□ 0.74
LIMK2P53671 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.65■□□□□ 0.74
LIMK2P53671 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.65■□□□□ 0.74
LIMK2P53671 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.65■□□□□ 0.74
LIMK2P53671 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.65■□□□□ 0.74
LIMK2P53671 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.65■□□□□ 0.74
LIMK2P53671 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.65■□□□□ 0.74
LIMK2P53671 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.65■□□□□ 0.74
LIMK2P53671 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIMK2P53671 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LIMK2P53671 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LIMK2P53671 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LIMK2P53671 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIMK2P53671 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LIMK2P53671 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.64■□□□□ 0.74
LIMK2P53671 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
LIMK2P53671 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIMK2P53671 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIMK2P53671 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIMK2P53671 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LIMK2P53671 RPPH1-201ENST00000516869 333 ntBASIC19.64■□□□□ 0.73
LIMK2P53671 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.64■□□□□ 0.73
LIMK2P53671 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.64■□□□□ 0.73
LIMK2P53671 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.64■□□□□ 0.73
LIMK2P53671 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.64■□□□□ 0.73
LIMK2P53671 RN7SL471P-201ENST00000580476 299 ntBASIC19.64■□□□□ 0.73
LIMK2P53671 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.64■□□□□ 0.73
LIMK2P53671 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LIMK2P53671 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIMK2P53671 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LIMK2P53671 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIMK2P53671 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIMK2P53671 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LIMK2P53671 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LIMK2P53671 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LIMK2P53671 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LIMK2P53671 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIMK2P53671 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIMK2P53671 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIMK2P53671 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIMK2P53671 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.63■□□□□ 0.73
LIMK2P53671 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIMK2P53671 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIMK2P53671 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LIMK2P53671 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.63■□□□□ 0.73
LIMK2P53671 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LIMK2P53671 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIMK2P53671 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LIMK2P53671 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.63■□□□□ 0.73
LIMK2P53671 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
LIMK2P53671 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIMK2P53671 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIMK2P53671 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LIMK2P53671 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.63■□□□□ 0.73
LIMK2P53671 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LIMK2P53671 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIMK2P53671 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
LIMK2P53671 C1QBPP2-201ENST00000528754 825 ntBASIC19.63■□□□□ 0.73
LIMK2P53671 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.63■□□□□ 0.73
LIMK2P53671 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.63■□□□□ 0.73
LIMK2P53671 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.63■□□□□ 0.73
LIMK2P53671 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
LIMK2P53671 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.63■□□□□ 0.73
LIMK2P53671 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIMK2P53671 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIMK2P53671 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK2P53671 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.62■□□□□ 0.73
LIMK2P53671 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LIMK2P53671 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK2P53671 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LIMK2P53671 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.62■□□□□ 0.73
LIMK2P53671 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK2P53671 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK2P53671 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
LIMK2P53671 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.62■□□□□ 0.73
LIMK2P53671 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.62■□□□□ 0.73
LIMK2P53671 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LIMK2P53671 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK2P53671 AC008550.1-201ENST00000511500 884 ntBASIC19.62■□□□□ 0.73
LIMK2P53671 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.62■□□□□ 0.73
LIMK2P53671 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.62■□□□□ 0.73
LIMK2P53671 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.62■□□□□ 0.73
LIMK2P53671 FAM197Y4-202ENST00000622692 608 ntBASIC19.62■□□□□ 0.73
LIMK2P53671 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK2P53671 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK2P53671 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK2P53671 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.62■□□□□ 0.73
LIMK2P53671 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK2P53671 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK2P53671 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK2P53671 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK2P53671 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.62■□□□□ 0.73
LIMK2P53671 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms