Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDR1P51861 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDR1P51861 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDR1P51861 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.28■■□□□ 1
CDR1P51861 AFG3L1P-217ENST00000557444 2447 ntBASIC21.28■■□□□ 1
CDR1P51861 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.28■■□□□ 1
CDR1P51861 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.28■■□□□ 1
CDR1P51861 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.28■■□□□ 1
CDR1P51861 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
CDR1P51861 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.28■■□□□ 1
CDR1P51861 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.28■■□□□ 1
CDR1P51861 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.28■■□□□ 1
CDR1P51861 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
CDR1P51861 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDR1P51861 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CDR1P51861 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDR1P51861 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDR1P51861 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.27■■□□□ 1
CDR1P51861 KRASP1-201ENST00000407852 552 ntBASIC21.27■■□□□ 1
CDR1P51861 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDR1P51861 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDR1P51861 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.27■■□□□ 1
CDR1P51861 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.27■■□□□ 1
CDR1P51861 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDR1P51861 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.27■■□□□ 1
CDR1P51861 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDR1P51861 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.27■■□□□ 1
CDR1P51861 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDR1P51861 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CDR1P51861 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.27■□□□□ 0.99
CDR1P51861 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
CDR1P51861 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDR1P51861 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.26■□□□□ 0.99
CDR1P51861 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.26■□□□□ 0.99
CDR1P51861 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CDR1P51861 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.26■□□□□ 0.99
CDR1P51861 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.26■□□□□ 0.99
CDR1P51861 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.26■□□□□ 0.99
CDR1P51861 AC008550.1-201ENST00000511500 884 ntBASIC21.26■□□□□ 0.99
CDR1P51861 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.26■□□□□ 0.99
CDR1P51861 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.26■□□□□ 0.99
CDR1P51861 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CDR1P51861 Z99916.2-201ENST00000604037 246 ntBASIC21.26■□□□□ 0.99
CDR1P51861 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.26■□□□□ 0.99
CDR1P51861 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDR1P51861 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.25■□□□□ 0.99
CDR1P51861 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDR1P51861 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CDR1P51861 AC092720.2-201ENST00000602388 1665 ntBASIC21.25■□□□□ 0.99
CDR1P51861 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.25■□□□□ 0.99
CDR1P51861 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDR1P51861 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.25■□□□□ 0.99
CDR1P51861 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDR1P51861 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
CDR1P51861 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.25■□□□□ 0.99
CDR1P51861 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.25■□□□□ 0.99
CDR1P51861 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.25■□□□□ 0.99
CDR1P51861 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDR1P51861 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CDR1P51861 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.25■□□□□ 0.99
CDR1P51861 AP006294.2-201ENST00000641667 209 ntBASIC21.25■□□□□ 0.99
CDR1P51861 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDR1P51861 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.25■□□□□ 0.99
CDR1P51861 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.25■□□□□ 0.99
CDR1P51861 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDR1P51861 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms