Protein–RNA interactions for Protein: P40616

ARL1, ADP-ribosylation factor-like protein 1, humanhuman

Predicted RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARL1P40616 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARL1P40616 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARL1P40616 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.26■□□□□ 0.67
ARL1P40616 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARL1P40616 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ARL1P40616 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARL1P40616 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARL1P40616 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARL1P40616 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARL1P40616 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARL1P40616 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ARL1P40616 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ARL1P40616 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
ARL1P40616 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.26■□□□□ 0.67
ARL1P40616 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.26■□□□□ 0.67
ARL1P40616 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.26■□□□□ 0.67
ARL1P40616 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARL1P40616 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.26■□□□□ 0.67
ARL1P40616 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ARL1P40616 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ARL1P40616 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ARL1P40616 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ARL1P40616 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ARL1P40616 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
ARL1P40616 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARL1P40616 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARL1P40616 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARL1P40616 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARL1P40616 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ARL1P40616 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARL1P40616 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARL1P40616 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARL1P40616 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ARL1P40616 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARL1P40616 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.25■□□□□ 0.67
ARL1P40616 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARL1P40616 BX276092.2-201ENST00000417668 665 ntBASIC19.25■□□□□ 0.67
ARL1P40616 AC026185.1-201ENST00000445748 174 ntBASIC19.25■□□□□ 0.67
ARL1P40616 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.25■□□□□ 0.67
ARL1P40616 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.25■□□□□ 0.67
ARL1P40616 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARL1P40616 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARL1P40616 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARL1P40616 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.25■□□□□ 0.67
ARL1P40616 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARL1P40616 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ARL1P40616 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARL1P40616 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ARL1P40616 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARL1P40616 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARL1P40616 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ARL1P40616 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARL1P40616 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARL1P40616 AC009237.14-201ENST00000609975 1594 ntBASIC19.24■□□□□ 0.67
ARL1P40616 AP001271.2-201ENST00000624018 1556 ntBASIC19.24■□□□□ 0.67
ARL1P40616 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARL1P40616 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.24■□□□□ 0.67
ARL1P40616 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.24■□□□□ 0.67
ARL1P40616 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ARL1P40616 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARL1P40616 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.24■□□□□ 0.67
ARL1P40616 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.24■□□□□ 0.67
ARL1P40616 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.24■□□□□ 0.67
ARL1P40616 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.24■□□□□ 0.67
ARL1P40616 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.24■□□□□ 0.67
ARL1P40616 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.24■□□□□ 0.67
ARL1P40616 AC133552.2-202ENST00000575694 574 ntBASIC19.24■□□□□ 0.67
ARL1P40616 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.24■□□□□ 0.67
ARL1P40616 PHGDH-210ENST00000641115 1638 ntBASIC19.24■□□□□ 0.67
ARL1P40616 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARL1P40616 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARL1P40616 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARL1P40616 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.24■□□□□ 0.67
ARL1P40616 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARL1P40616 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARL1P40616 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.24■□□□□ 0.67
ARL1P40616 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARL1P40616 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARL1P40616 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARL1P40616 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARL1P40616 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.23■□□□□ 0.67
ARL1P40616 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ARL1P40616 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
ARL1P40616 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.23■□□□□ 0.67
ARL1P40616 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARL1P40616 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARL1P40616 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARL1P40616 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.23■□□□□ 0.67
ARL1P40616 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARL1P40616 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARL1P40616 AC006970.2-201ENST00000450065 779 ntBASIC19.23■□□□□ 0.67
ARL1P40616 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.23■□□□□ 0.67
ARL1P40616 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
ARL1P40616 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ARL1P40616 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.23■□□□□ 0.67
ARL1P40616 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARL1P40616 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARL1P40616 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARL1P40616 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
ARL1P40616 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms