Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 FXN-203ENST00000396366 922 ntTSL 2 BASIC24.59■■□□□ 1.53
RFC4P35249 AC112907.2-201ENST00000448639 330 ntBASIC24.59■■□□□ 1.53
RFC4P35249 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
RFC4P35249 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC24.59■■□□□ 1.53
RFC4P35249 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.59■■□□□ 1.53
RFC4P35249 AL691432.3-201ENST00000621860 400 ntBASIC24.59■■□□□ 1.53
RFC4P35249 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC24.59■■□□□ 1.53
RFC4P35249 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
RFC4P35249 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
RFC4P35249 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RFC4P35249 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RFC4P35249 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RFC4P35249 SMG8-203ENST00000578922 2178 ntBASIC24.59■■□□□ 1.53
RFC4P35249 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RFC4P35249 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RFC4P35249 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RFC4P35249 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
RFC4P35249 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC24.58■■□□□ 1.53
RFC4P35249 NME1-207ENST00000480143 964 ntTSL 2 BASIC24.58■■□□□ 1.53
RFC4P35249 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC24.58■■□□□ 1.53
RFC4P35249 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.58■■□□□ 1.53
RFC4P35249 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.58■■□□□ 1.53
RFC4P35249 LINC01465-201ENST00000408887 1940 ntBASIC24.58■■□□□ 1.53
RFC4P35249 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.58■■□□□ 1.53
RFC4P35249 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.58■■□□□ 1.53
RFC4P35249 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.58■■□□□ 1.52
RFC4P35249 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
RFC4P35249 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RFC4P35249 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.57■■□□□ 1.52
RFC4P35249 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RFC4P35249 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RFC4P35249 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RFC4P35249 AP000523.1-201ENST00000398242 1049 ntBASIC24.57■■□□□ 1.52
RFC4P35249 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
RFC4P35249 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.57■■□□□ 1.52
RFC4P35249 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC24.57■■□□□ 1.52
RFC4P35249 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
RFC4P35249 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC24.57■■□□□ 1.52
RFC4P35249 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC24.57■■□□□ 1.52
RFC4P35249 ZNF444P1-201ENST00000559497 298 ntBASIC24.57■■□□□ 1.52
RFC4P35249 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC24.57■■□□□ 1.52
RFC4P35249 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RFC4P35249 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC24.57■■□□□ 1.52
RFC4P35249 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.57■■□□□ 1.52
RFC4P35249 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RFC4P35249 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RFC4P35249 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RFC4P35249 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RFC4P35249 AC133561.1-201ENST00000568600 2415 ntBASIC24.56■■□□□ 1.52
RFC4P35249 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RFC4P35249 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
RFC4P35249 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RFC4P35249 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
RFC4P35249 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC24.56■■□□□ 1.52
RFC4P35249 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC24.56■■□□□ 1.52
RFC4P35249 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.55■■□□□ 1.52
RFC4P35249 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.55■■□□□ 1.52
RFC4P35249 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RFC4P35249 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RFC4P35249 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RFC4P35249 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RFC4P35249 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RFC4P35249 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC24.55■■□□□ 1.52
RFC4P35249 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
RFC4P35249 AC083849.1-201ENST00000615227 514 ntBASIC24.55■■□□□ 1.52
RFC4P35249 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
RFC4P35249 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
RFC4P35249 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC24.55■■□□□ 1.52
RFC4P35249 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC24.55■■□□□ 1.52
RFC4P35249 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
RFC4P35249 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RFC4P35249 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
RFC4P35249 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RFC4P35249 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.54■■□□□ 1.52
RFC4P35249 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.54■■□□□ 1.52
RFC4P35249 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RFC4P35249 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.54■■□□□ 1.52
RFC4P35249 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RFC4P35249 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RFC4P35249 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
RFC4P35249 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RFC4P35249 PHB2-202ENST00000440277 996 ntTSL 5 BASIC24.54■■□□□ 1.52
RFC4P35249 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RFC4P35249 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC24.54■■□□□ 1.52
RFC4P35249 AC012313.10-201ENST00000623509 926 ntBASIC24.54■■□□□ 1.52
RFC4P35249 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RFC4P35249 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RFC4P35249 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.54■■□□□ 1.52
RFC4P35249 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RFC4P35249 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RFC4P35249 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RFC4P35249 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC24.54■■□□□ 1.52
RFC4P35249 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RFC4P35249 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RFC4P35249 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RFC4P35249 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RFC4P35249 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC24.53■■□□□ 1.52
RFC4P35249 KRT8P41-201ENST00000533985 1514 ntBASIC24.53■■□□□ 1.52
RFC4P35249 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RFC4P35249 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms