Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL8A2P25067 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL8A2P25067 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.48■□□□□ 0.23
COL8A2P25067 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.48■□□□□ 0.23
COL8A2P25067 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL8A2P25067 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL8A2P25067 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.48■□□□□ 0.23
COL8A2P25067 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
COL8A2P25067 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL8A2P25067 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.48■□□□□ 0.23
COL8A2P25067 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL8A2P25067 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.48■□□□□ 0.23
COL8A2P25067 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.48■□□□□ 0.23
COL8A2P25067 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.48■□□□□ 0.23
COL8A2P25067 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL8A2P25067 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL8A2P25067 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL8A2P25067 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
COL8A2P25067 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL8A2P25067 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.48■□□□□ 0.23
COL8A2P25067 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL8A2P25067 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
COL8A2P25067 AP001271.2-201ENST00000624018 1556 ntBASIC16.47■□□□□ 0.23
COL8A2P25067 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
COL8A2P25067 MMP23A-201ENST00000234610 1017 ntBASIC16.47■□□□□ 0.23
COL8A2P25067 RBM17P1-201ENST00000453646 1190 ntBASIC16.47■□□□□ 0.23
COL8A2P25067 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.47■□□□□ 0.23
COL8A2P25067 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.47■□□□□ 0.23
COL8A2P25067 AC116562.2-201ENST00000507042 360 ntBASIC16.47■□□□□ 0.23
COL8A2P25067 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.47■□□□□ 0.23
COL8A2P25067 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.47■□□□□ 0.23
COL8A2P25067 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.47■□□□□ 0.23
COL8A2P25067 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.47■□□□□ 0.23
COL8A2P25067 LINC01023-201ENST00000606054 436 ntBASIC16.47■□□□□ 0.23
COL8A2P25067 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.47■□□□□ 0.23
COL8A2P25067 AL031985.4-201ENST00000642138 673 ntBASIC16.47■□□□□ 0.23
COL8A2P25067 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.47■□□□□ 0.23
COL8A2P25067 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
COL8A2P25067 AC079598.2-202ENST00000546624 1451 ntBASIC16.47■□□□□ 0.23
COL8A2P25067 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.47■□□□□ 0.23
COL8A2P25067 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL8A2P25067 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.47■□□□□ 0.23
COL8A2P25067 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL8A2P25067 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL8A2P25067 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COL8A2P25067 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.46■□□□□ 0.23
COL8A2P25067 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL8A2P25067 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.46■□□□□ 0.23
COL8A2P25067 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.46■□□□□ 0.23
COL8A2P25067 UNC93B2-201ENST00000285383 730 ntBASIC16.46■□□□□ 0.23
COL8A2P25067 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL8A2P25067 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL8A2P25067 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.46■□□□□ 0.23
COL8A2P25067 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.46■□□□□ 0.23
COL8A2P25067 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL8A2P25067 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL8A2P25067 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.46■□□□□ 0.23
COL8A2P25067 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.46■□□□□ 0.23
COL8A2P25067 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.46■□□□□ 0.23
COL8A2P25067 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL8A2P25067 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.46■□□□□ 0.23
COL8A2P25067 AL445675.2-201ENST00000620291 557 ntBASIC16.46■□□□□ 0.23
COL8A2P25067 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.46■□□□□ 0.23
COL8A2P25067 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.46■□□□□ 0.23
COL8A2P25067 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL8A2P25067 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL8A2P25067 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL8A2P25067 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.46■□□□□ 0.23
COL8A2P25067 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL8A2P25067 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.46■□□□□ 0.23
COL8A2P25067 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.46■□□□□ 0.23
COL8A2P25067 AC112907.3-201ENST00000577781 2400 ntBASIC16.46■□□□□ 0.23
COL8A2P25067 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
COL8A2P25067 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.46■□□□□ 0.22
COL8A2P25067 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.46■□□□□ 0.22
COL8A2P25067 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
COL8A2P25067 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.45■□□□□ 0.22
COL8A2P25067 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms