Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HOXC6P09630 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HOXC6P09630 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HOXC6P09630 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HOXC6P09630 PCED1CP-201ENST00000419887 785 ntBASIC22.09■■□□□ 1.13
HOXC6P09630 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.09■■□□□ 1.13
HOXC6P09630 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
HOXC6P09630 KRT126P-201ENST00000549467 1181 ntBASIC22.09■■□□□ 1.13
HOXC6P09630 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.09■■□□□ 1.13
HOXC6P09630 AL160286.2-201ENST00000567150 934 ntBASIC22.09■■□□□ 1.13
HOXC6P09630 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.09■■□□□ 1.13
HOXC6P09630 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HOXC6P09630 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.09■■□□□ 1.13
HOXC6P09630 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HOXC6P09630 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.09■■□□□ 1.13
HOXC6P09630 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
HOXC6P09630 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HOXC6P09630 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.08■■□□□ 1.13
HOXC6P09630 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HOXC6P09630 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HOXC6P09630 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.08■■□□□ 1.13
HOXC6P09630 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.08■■□□□ 1.13
HOXC6P09630 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
HOXC6P09630 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
HOXC6P09630 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.08■■□□□ 1.13
HOXC6P09630 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.08■■□□□ 1.13
HOXC6P09630 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
HOXC6P09630 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HOXC6P09630 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.08■■□□□ 1.13
HOXC6P09630 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.08■■□□□ 1.13
HOXC6P09630 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HOXC6P09630 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.08■■□□□ 1.12
HOXC6P09630 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
HOXC6P09630 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.07■■□□□ 1.12
HOXC6P09630 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HOXC6P09630 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HOXC6P09630 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
HOXC6P09630 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
HOXC6P09630 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.07■■□□□ 1.12
HOXC6P09630 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.07■■□□□ 1.12
HOXC6P09630 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HOXC6P09630 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.07■■□□□ 1.12
HOXC6P09630 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HOXC6P09630 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC22.07■■□□□ 1.12
HOXC6P09630 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.07■■□□□ 1.12
HOXC6P09630 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.07■■□□□ 1.12
HOXC6P09630 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.07■■□□□ 1.12
HOXC6P09630 AC008622.2-201ENST00000617006 1229 ntBASIC22.07■■□□□ 1.12
HOXC6P09630 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HOXC6P09630 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.07■■□□□ 1.12
HOXC6P09630 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HOXC6P09630 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HOXC6P09630 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.07■■□□□ 1.12
HOXC6P09630 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HOXC6P09630 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.06■■□□□ 1.12
HOXC6P09630 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
HOXC6P09630 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HOXC6P09630 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.06■■□□□ 1.12
HOXC6P09630 CD320-202ENST00000537716 1119 ntTSL 2 BASIC22.06■■□□□ 1.12
HOXC6P09630 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.06■■□□□ 1.12
HOXC6P09630 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
HOXC6P09630 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.06■■□□□ 1.12
HOXC6P09630 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
HOXC6P09630 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HOXC6P09630 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.06■■□□□ 1.12
HOXC6P09630 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
HOXC6P09630 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.06■■□□□ 1.12
HOXC6P09630 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
HOXC6P09630 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HOXC6P09630 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HOXC6P09630 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.06■■□□□ 1.12
HOXC6P09630 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.05■■□□□ 1.12
HOXC6P09630 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.05■■□□□ 1.12
HOXC6P09630 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HOXC6P09630 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.05■■□□□ 1.12
HOXC6P09630 IER3-202ENST00000376377 1350 ntBASIC22.05■■□□□ 1.12
HOXC6P09630 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
HOXC6P09630 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HOXC6P09630 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC22.05■■□□□ 1.12
HOXC6P09630 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.05■■□□□ 1.12
HOXC6P09630 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HOXC6P09630 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC22.05■■□□□ 1.12
HOXC6P09630 AL441883.1-201ENST00000566170 1045 ntBASIC22.05■■□□□ 1.12
HOXC6P09630 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
HOXC6P09630 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.05■■□□□ 1.12
HOXC6P09630 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.05■■□□□ 1.12
HOXC6P09630 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.05■■□□□ 1.12
HOXC6P09630 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
HOXC6P09630 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HOXC6P09630 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.04■■□□□ 1.12
HOXC6P09630 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.04■■□□□ 1.12
HOXC6P09630 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC22.04■■□□□ 1.12
HOXC6P09630 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.04■■□□□ 1.12
HOXC6P09630 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC22.04■■□□□ 1.12
HOXC6P09630 CKBP1-201ENST00000565489 1086 ntBASIC22.04■■□□□ 1.12
HOXC6P09630 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC22.04■■□□□ 1.12
HOXC6P09630 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.04■■□□□ 1.12
HOXC6P09630 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.04■■□□□ 1.12
HOXC6P09630 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.04■■□□□ 1.12
HOXC6P09630 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms