Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CD48P09326 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.22■□□□□ 0.83
CD48P09326 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.22■□□□□ 0.83
CD48P09326 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.22■□□□□ 0.83
CD48P09326 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.22■□□□□ 0.83
CD48P09326 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CD48P09326 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.22■□□□□ 0.83
CD48P09326 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.22■□□□□ 0.83
CD48P09326 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CD48P09326 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CD48P09326 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD48P09326 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD48P09326 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD48P09326 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD48P09326 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
CD48P09326 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD48P09326 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.21■□□□□ 0.83
CD48P09326 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.21■□□□□ 0.83
CD48P09326 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD48P09326 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CD48P09326 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.21■□□□□ 0.83
CD48P09326 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
CD48P09326 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD48P09326 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
CD48P09326 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD48P09326 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.21■□□□□ 0.83
CD48P09326 KRT18P6-201ENST00000555540 1265 ntBASIC20.21■□□□□ 0.83
CD48P09326 AC233263.1-201ENST00000578059 224 ntBASIC20.21■□□□□ 0.83
CD48P09326 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.21■□□□□ 0.83
CD48P09326 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD48P09326 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.21■□□□□ 0.83
CD48P09326 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.21■□□□□ 0.83
CD48P09326 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD48P09326 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD48P09326 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD48P09326 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.21■□□□□ 0.83
CD48P09326 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CD48P09326 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CD48P09326 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CD48P09326 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 YBX1P10-201ENST00000444752 975 ntBASIC20.2■□□□□ 0.82
CD48P09326 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.2■□□□□ 0.82
CD48P09326 AP003097.1-201ENST00000530657 1135 ntBASIC20.2■□□□□ 0.82
CD48P09326 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.2■□□□□ 0.82
CD48P09326 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.2■□□□□ 0.82
CD48P09326 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.2■□□□□ 0.82
CD48P09326 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CD48P09326 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CD48P09326 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CD48P09326 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CD48P09326 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CD48P09326 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.19■□□□□ 0.82
CD48P09326 AC018445.3-201ENST00000624177 1945 ntBASIC20.19■□□□□ 0.82
CD48P09326 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.19■□□□□ 0.82
CD48P09326 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD48P09326 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.19■□□□□ 0.82
CD48P09326 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD48P09326 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CD48P09326 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD48P09326 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD48P09326 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CD48P09326 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD48P09326 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CD48P09326 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CD48P09326 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.19■□□□□ 0.82
CD48P09326 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CD48P09326 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.19■□□□□ 0.82
CD48P09326 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.19■□□□□ 0.82
CD48P09326 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.19■□□□□ 0.82
CD48P09326 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.19■□□□□ 0.82
CD48P09326 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD48P09326 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.19■□□□□ 0.82
CD48P09326 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD48P09326 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CD48P09326 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD48P09326 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.19■□□□□ 0.82
CD48P09326 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CD48P09326 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.18■□□□□ 0.82
CD48P09326 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CD48P09326 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms