Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHRNA1P02708 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHRNA1P02708 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHRNA1P02708 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNA1P02708 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNA1P02708 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CHRNA1P02708 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CHRNA1P02708 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CHRNA1P02708 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.26■□□□□ 0.99
CHRNA1P02708 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNA1P02708 KRT8P41-201ENST00000533985 1514 ntBASIC21.26■□□□□ 0.99
CHRNA1P02708 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNA1P02708 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNA1P02708 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.26■□□□□ 0.99
CHRNA1P02708 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNA1P02708 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.26■□□□□ 0.99
CHRNA1P02708 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.26■□□□□ 0.99
CHRNA1P02708 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.26■□□□□ 0.99
CHRNA1P02708 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNA1P02708 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CHRNA1P02708 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CHRNA1P02708 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNA1P02708 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CHRNA1P02708 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CHRNA1P02708 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.26■□□□□ 0.99
CHRNA1P02708 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.26■□□□□ 0.99
CHRNA1P02708 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CHRNA1P02708 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNA1P02708 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.25■□□□□ 0.99
CHRNA1P02708 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CHRNA1P02708 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNA1P02708 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNA1P02708 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.25■□□□□ 0.99
CHRNA1P02708 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
CHRNA1P02708 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.25■□□□□ 0.99
CHRNA1P02708 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.25■□□□□ 0.99
CHRNA1P02708 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.25■□□□□ 0.99
CHRNA1P02708 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CHRNA1P02708 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNA1P02708 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.25■□□□□ 0.99
CHRNA1P02708 AL353719.1-201ENST00000566847 864 ntBASIC21.25■□□□□ 0.99
CHRNA1P02708 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.25■□□□□ 0.99
CHRNA1P02708 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.25■□□□□ 0.99
CHRNA1P02708 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.25■□□□□ 0.99
CHRNA1P02708 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNA1P02708 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNA1P02708 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNA1P02708 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.24■□□□□ 0.99
CHRNA1P02708 AL137060.1-201ENST00000618151 2648 ntBASIC21.24■□□□□ 0.99
CHRNA1P02708 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNA1P02708 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNA1P02708 RNF152P1-201ENST00000397754 604 ntBASIC21.24■□□□□ 0.99
CHRNA1P02708 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNA1P02708 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.24■□□□□ 0.99
CHRNA1P02708 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNA1P02708 TSPY17P-201ENST00000450329 467 ntBASIC21.24■□□□□ 0.99
CHRNA1P02708 YBX1P2-201ENST00000489612 999 ntBASIC21.24■□□□□ 0.99
CHRNA1P02708 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHRNA1P02708 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.24■□□□□ 0.99
CHRNA1P02708 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.24■□□□□ 0.99
CHRNA1P02708 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNA1P02708 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.24■□□□□ 0.99
CHRNA1P02708 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNA1P02708 AP005212.1-201ENST00000581547 1997 ntBASIC21.24■□□□□ 0.99
CHRNA1P02708 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNA1P02708 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CHRNA1P02708 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CHRNA1P02708 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNA1P02708 AL162377.1-201ENST00000618844 1793 ntBASIC21.23■□□□□ 0.99
CHRNA1P02708 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CHRNA1P02708 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNA1P02708 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNA1P02708 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CHRNA1P02708 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNA1P02708 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.23■□□□□ 0.99
CHRNA1P02708 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.23■□□□□ 0.99
CHRNA1P02708 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
CHRNA1P02708 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.23■□□□□ 0.99
CHRNA1P02708 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNA1P02708 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.23■□□□□ 0.99
CHRNA1P02708 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNA1P02708 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CHRNA1P02708 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CHRNA1P02708 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.23■□□□□ 0.99
CHRNA1P02708 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNA1P02708 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNA1P02708 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNA1P02708 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CHRNA1P02708 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
CHRNA1P02708 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.22■□□□□ 0.99
CHRNA1P02708 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CHRNA1P02708 AL391422.3-201ENST00000603791 2761 ntBASIC21.22■□□□□ 0.99
CHRNA1P02708 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNA1P02708 FAM8A6P-201ENST00000407496 1135 ntBASIC21.22■□□□□ 0.99
CHRNA1P02708 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.22■□□□□ 0.99
CHRNA1P02708 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.22■□□□□ 0.99
CHRNA1P02708 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.22■□□□□ 0.99
CHRNA1P02708 AC141257.4-201ENST00000634557 245 ntBASIC21.22■□□□□ 0.99
CHRNA1P02708 AC136944.6-201ENST00000634818 245 ntBASIC21.22■□□□□ 0.99
CHRNA1P02708 MYC-208ENST00000641036 567 ntBASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms