Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TNFP01375 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFP01375 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFP01375 FAM207BP-201ENST00000447172 505 ntBASIC19.07■□□□□ 0.64
TNFP01375 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFP01375 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFP01375 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFP01375 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.07■□□□□ 0.64
TNFP01375 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
TNFP01375 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFP01375 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFP01375 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TNFP01375 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.07■□□□□ 0.64
TNFP01375 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TNFP01375 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFP01375 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFP01375 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFP01375 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.07■□□□□ 0.64
TNFP01375 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFP01375 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFP01375 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFP01375 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFP01375 AC092667.1-201ENST00000434301 2586 ntBASIC19.06■□□□□ 0.64
TNFP01375 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFP01375 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFP01375 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFP01375 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFP01375 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFP01375 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFP01375 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TNFP01375 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.06■□□□□ 0.64
TNFP01375 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFP01375 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFP01375 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TNFP01375 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TNFP01375 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFP01375 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFP01375 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TNFP01375 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFP01375 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFP01375 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFP01375 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TNFP01375 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFP01375 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFP01375 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFP01375 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFP01375 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TNFP01375 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.05■□□□□ 0.64
TNFP01375 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
TNFP01375 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFP01375 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.05■□□□□ 0.64
TNFP01375 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.05■□□□□ 0.64
TNFP01375 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFP01375 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFP01375 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFP01375 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFP01375 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TNFP01375 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TNFP01375 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.04■□□□□ 0.64
TNFP01375 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TNFP01375 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFP01375 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.04■□□□□ 0.64
TNFP01375 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TNFP01375 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFP01375 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFP01375 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFP01375 AC008040.2-201ENST00000461049 708 ntBASIC19.04■□□□□ 0.64
TNFP01375 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFP01375 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.04■□□□□ 0.64
TNFP01375 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFP01375 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFP01375 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFP01375 AC099778.1-201ENST00000568593 1911 ntBASIC19.04■□□□□ 0.64
TNFP01375 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TNFP01375 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFP01375 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.03■□□□□ 0.64
TNFP01375 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TNFP01375 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFP01375 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFP01375 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.03■□□□□ 0.64
TNFP01375 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFP01375 TMPOP1-202ENST00000424642 1267 ntBASIC19.03■□□□□ 0.64
TNFP01375 AC091390.4-202ENST00000476426 537 ntBASIC19.03■□□□□ 0.64
TNFP01375 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.03■□□□□ 0.64
TNFP01375 Z85996.1-201ENST00000494644 937 ntBASIC19.03■□□□□ 0.64
TNFP01375 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.03■□□□□ 0.64
TNFP01375 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.03■□□□□ 0.64
TNFP01375 EGLN1P1-201ENST00000531623 762 ntBASIC19.03■□□□□ 0.64
TNFP01375 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFP01375 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.03■□□□□ 0.64
TNFP01375 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.03■□□□□ 0.64
TNFP01375 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFP01375 AC010331.1-201ENST00000611423 582 ntBASIC19.03■□□□□ 0.64
TNFP01375 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
TNFP01375 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.03■□□□□ 0.64
TNFP01375 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFP01375 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TNFP01375 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFP01375 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFP01375 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms