Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFBP01127 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFBP01127 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFBP01127 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.67■□□□□ 0.74
PDGFBP01127 AC079776.4-201ENST00000511039 504 ntBASIC19.67■□□□□ 0.74
PDGFBP01127 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.67■□□□□ 0.74
PDGFBP01127 NEK4P2-201ENST00000580004 1012 ntBASIC19.67■□□□□ 0.74
PDGFBP01127 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFBP01127 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.67■□□□□ 0.74
PDGFBP01127 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.67■□□□□ 0.74
PDGFBP01127 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFBP01127 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFBP01127 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFBP01127 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFBP01127 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.66■□□□□ 0.74
PDGFBP01127 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFBP01127 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PDGFBP01127 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PDGFBP01127 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFBP01127 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PDGFBP01127 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFBP01127 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.66■□□□□ 0.74
PDGFBP01127 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFBP01127 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
PDGFBP01127 AC139530.3-201ENST00000620344 690 ntBASIC19.66■□□□□ 0.74
PDGFBP01127 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.66■□□□□ 0.74
PDGFBP01127 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFBP01127 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFBP01127 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFBP01127 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.66■□□□□ 0.74
PDGFBP01127 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFBP01127 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.66■□□□□ 0.74
PDGFBP01127 PHGDH-210ENST00000641115 1638 ntBASIC19.65■□□□□ 0.74
PDGFBP01127 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.65■□□□□ 0.74
PDGFBP01127 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFBP01127 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFBP01127 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFBP01127 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFBP01127 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PDGFBP01127 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PDGFBP01127 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.65■□□□□ 0.74
PDGFBP01127 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFBP01127 AL160237.2-201ENST00000556165 472 ntBASIC19.65■□□□□ 0.74
PDGFBP01127 AL671883.3-201ENST00000603274 991 ntBASIC19.65■□□□□ 0.74
PDGFBP01127 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
PDGFBP01127 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.65■□□□□ 0.74
PDGFBP01127 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFBP01127 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.65■□□□□ 0.74
PDGFBP01127 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFBP01127 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFBP01127 BX119927.1-201ENST00000636596 1552 ntBASIC19.65■□□□□ 0.74
PDGFBP01127 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.65■□□□□ 0.74
PDGFBP01127 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFBP01127 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFBP01127 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFBP01127 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.64■□□□□ 0.74
PDGFBP01127 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PDGFBP01127 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDGFBP01127 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PDGFBP01127 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.64■□□□□ 0.73
PDGFBP01127 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.64■□□□□ 0.73
PDGFBP01127 BX276092.5-203ENST00000456199 560 ntBASIC19.64■□□□□ 0.73
PDGFBP01127 AL160286.2-201ENST00000567150 934 ntBASIC19.64■□□□□ 0.73
PDGFBP01127 AP002414.4-201ENST00000589764 1148 ntBASIC19.64■□□□□ 0.73
PDGFBP01127 AC011498.5-201ENST00000592027 486 ntBASIC19.64■□□□□ 0.73
PDGFBP01127 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDGFBP01127 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
PDGFBP01127 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
PDGFBP01127 TMEM179-206ENST00000616017 1645 ntBASIC19.64■□□□□ 0.73
PDGFBP01127 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDGFBP01127 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
PDGFBP01127 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.64■□□□□ 0.73
PDGFBP01127 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PDGFBP01127 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PDGFBP01127 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.63■□□□□ 0.73
PDGFBP01127 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
PDGFBP01127 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.63■□□□□ 0.73
PDGFBP01127 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
PDGFBP01127 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.63■□□□□ 0.73
PDGFBP01127 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
PDGFBP01127 AL121672.3-201ENST00000608644 468 ntBASIC19.63■□□□□ 0.73
PDGFBP01127 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.63■□□□□ 0.73
PDGFBP01127 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFBP01127 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.62■□□□□ 0.73
PDGFBP01127 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms