Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX4O95219 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX4O95219 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX4O95219 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SNX4O95219 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX4O95219 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX4O95219 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.29■□□□□ 0.52
SNX4O95219 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX4O95219 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SNX4O95219 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX4O95219 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SNX4O95219 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX4O95219 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX4O95219 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX4O95219 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX4O95219 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.29■□□□□ 0.52
SNX4O95219 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX4O95219 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SNX4O95219 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.29■□□□□ 0.52
SNX4O95219 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX4O95219 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.29■□□□□ 0.52
SNX4O95219 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.29■□□□□ 0.52
SNX4O95219 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX4O95219 KRT8P17-201ENST00000453110 1448 ntBASIC18.29■□□□□ 0.52
SNX4O95219 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX4O95219 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX4O95219 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX4O95219 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX4O95219 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX4O95219 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SNX4O95219 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX4O95219 DPP3P2-201ENST00000416030 1696 ntBASIC18.28■□□□□ 0.52
SNX4O95219 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX4O95219 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SNX4O95219 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX4O95219 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX4O95219 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX4O95219 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX4O95219 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX4O95219 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.28■□□□□ 0.52
SNX4O95219 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX4O95219 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX4O95219 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.28■□□□□ 0.52
SNX4O95219 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX4O95219 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.28■□□□□ 0.52
SNX4O95219 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SNX4O95219 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX4O95219 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX4O95219 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX4O95219 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX4O95219 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX4O95219 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX4O95219 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX4O95219 AC099778.1-201ENST00000568593 1911 ntBASIC18.27■□□□□ 0.52
SNX4O95219 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX4O95219 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX4O95219 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX4O95219 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.27■□□□□ 0.52
SNX4O95219 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNX4O95219 PRORSD1P-201ENST00000295112 541 ntBASIC18.27■□□□□ 0.52
SNX4O95219 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.27■□□□□ 0.52
SNX4O95219 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.27■□□□□ 0.52
SNX4O95219 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
SNX4O95219 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.27■□□□□ 0.52
SNX4O95219 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.27■□□□□ 0.52
SNX4O95219 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.27■□□□□ 0.52
SNX4O95219 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.27■□□□□ 0.52
SNX4O95219 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNX4O95219 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNX4O95219 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNX4O95219 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX4O95219 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
SNX4O95219 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX4O95219 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX4O95219 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX4O95219 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX4O95219 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX4O95219 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX4O95219 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX4O95219 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.26■□□□□ 0.51
SNX4O95219 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX4O95219 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX4O95219 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX4O95219 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.26■□□□□ 0.51
SNX4O95219 AC069544.1-201ENST00000609399 999 ntBASIC18.26■□□□□ 0.51
SNX4O95219 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.26■□□□□ 0.51
SNX4O95219 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX4O95219 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.26■□□□□ 0.51
SNX4O95219 AL512408.1-201ENST00000569378 2000 ntBASIC18.26■□□□□ 0.51
SNX4O95219 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX4O95219 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX4O95219 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SNX4O95219 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX4O95219 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX4O95219 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX4O95219 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SNX4O95219 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX4O95219 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SNX4O95219 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX4O95219 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms