Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.31■□□□□ 0.84
LRCH4O75427 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH4O75427 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH4O75427 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.31■□□□□ 0.84
LRCH4O75427 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.31■□□□□ 0.84
LRCH4O75427 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
LRCH4O75427 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH4O75427 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH4O75427 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.31■□□□□ 0.84
LRCH4O75427 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.31■□□□□ 0.84
LRCH4O75427 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH4O75427 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
LRCH4O75427 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.31■□□□□ 0.84
LRCH4O75427 AC233263.1-201ENST00000578059 224 ntBASIC20.31■□□□□ 0.84
LRCH4O75427 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH4O75427 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.31■□□□□ 0.84
LRCH4O75427 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.31■□□□□ 0.84
LRCH4O75427 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH4O75427 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH4O75427 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.31■□□□□ 0.84
LRCH4O75427 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH4O75427 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH4O75427 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH4O75427 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LRCH4O75427 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH4O75427 AC087289.5-201ENST00000586076 3175 ntBASIC20.3■□□□□ 0.84
LRCH4O75427 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH4O75427 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LRCH4O75427 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH4O75427 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.3■□□□□ 0.84
LRCH4O75427 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH4O75427 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH4O75427 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH4O75427 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH4O75427 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.3■□□□□ 0.84
LRCH4O75427 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.3■□□□□ 0.84
LRCH4O75427 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.3■□□□□ 0.84
LRCH4O75427 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.3■□□□□ 0.84
LRCH4O75427 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.3■□□□□ 0.84
LRCH4O75427 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.3■□□□□ 0.84
LRCH4O75427 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.3■□□□□ 0.84
LRCH4O75427 AC069544.1-201ENST00000609399 999 ntBASIC20.3■□□□□ 0.84
LRCH4O75427 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.3■□□□□ 0.84
LRCH4O75427 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH4O75427 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH4O75427 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH4O75427 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LRCH4O75427 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.3■□□□□ 0.84
LRCH4O75427 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LRCH4O75427 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.3■□□□□ 0.84
LRCH4O75427 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LRCH4O75427 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.29■□□□□ 0.84
LRCH4O75427 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.29■□□□□ 0.84
LRCH4O75427 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.29■□□□□ 0.84
LRCH4O75427 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.29■□□□□ 0.84
LRCH4O75427 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
LRCH4O75427 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH4O75427 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
LRCH4O75427 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LRCH4O75427 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LRCH4O75427 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.28■□□□□ 0.84
LRCH4O75427 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.28■□□□□ 0.84
LRCH4O75427 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.28■□□□□ 0.84
LRCH4O75427 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 MTDHP1-201ENST00000605323 784 ntBASIC20.28■□□□□ 0.84
LRCH4O75427 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.28■□□□□ 0.84
LRCH4O75427 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.28■□□□□ 0.84
LRCH4O75427 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LRCH4O75427 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.28■□□□□ 0.84
LRCH4O75427 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.28■□□□□ 0.84
LRCH4O75427 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.28■□□□□ 0.84
LRCH4O75427 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH4O75427 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LRCH4O75427 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms