Protein–RNA interactions for Protein: O75164

KDM4A, Lysine-specific demethylase 4A, humanhuman

Predictions only

Length 1,064 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4AO75164 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
KDM4AO75164 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KDM4AO75164 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KDM4AO75164 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
KDM4AO75164 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KDM4AO75164 AP006587.1-201ENST00000534129 1502 ntBASIC23.24■■□□□ 1.31
KDM4AO75164 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KDM4AO75164 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
KDM4AO75164 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.24■■□□□ 1.31
KDM4AO75164 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KDM4AO75164 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KDM4AO75164 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.24■■□□□ 1.31
KDM4AO75164 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
KDM4AO75164 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.24■■□□□ 1.31
KDM4AO75164 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KDM4AO75164 AC133681.1-201ENST00000465482 601 ntBASIC23.24■■□□□ 1.31
KDM4AO75164 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.24■■□□□ 1.31
KDM4AO75164 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
KDM4AO75164 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.24■■□□□ 1.31
KDM4AO75164 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KDM4AO75164 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KDM4AO75164 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
KDM4AO75164 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.24■■□□□ 1.31
KDM4AO75164 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
KDM4AO75164 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KDM4AO75164 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.24■■□□□ 1.31
KDM4AO75164 NBPF21P-201ENST00000425093 1451 ntBASIC23.24■■□□□ 1.31
KDM4AO75164 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
KDM4AO75164 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KDM4AO75164 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.23■■□□□ 1.31
KDM4AO75164 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.23■■□□□ 1.31
KDM4AO75164 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
KDM4AO75164 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KDM4AO75164 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.23■■□□□ 1.31
KDM4AO75164 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
KDM4AO75164 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KDM4AO75164 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KDM4AO75164 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.23■■□□□ 1.31
KDM4AO75164 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KDM4AO75164 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.23■■□□□ 1.31
KDM4AO75164 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.23■■□□□ 1.31
KDM4AO75164 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.23■■□□□ 1.31
KDM4AO75164 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.23■■□□□ 1.31
KDM4AO75164 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.23■■□□□ 1.31
KDM4AO75164 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KDM4AO75164 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KDM4AO75164 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
KDM4AO75164 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
KDM4AO75164 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.23■■□□□ 1.31
KDM4AO75164 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KDM4AO75164 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.22■■□□□ 1.31
KDM4AO75164 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KDM4AO75164 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
KDM4AO75164 TMEM179-206ENST00000616017 1645 ntBASIC23.22■■□□□ 1.31
KDM4AO75164 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.22■■□□□ 1.31
KDM4AO75164 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
KDM4AO75164 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.22■■□□□ 1.31
KDM4AO75164 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KDM4AO75164 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.22■■□□□ 1.31
KDM4AO75164 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
KDM4AO75164 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
KDM4AO75164 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.22■■□□□ 1.31
KDM4AO75164 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.22■■□□□ 1.31
KDM4AO75164 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.22■■□□□ 1.31
KDM4AO75164 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.22■■□□□ 1.31
KDM4AO75164 FAM197Y4-202ENST00000622692 608 ntBASIC23.22■■□□□ 1.31
KDM4AO75164 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.22■■□□□ 1.31
KDM4AO75164 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KDM4AO75164 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
KDM4AO75164 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KDM4AO75164 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.21■■□□□ 1.31
KDM4AO75164 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
KDM4AO75164 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
KDM4AO75164 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.21■■□□□ 1.31
KDM4AO75164 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
KDM4AO75164 AC110285.5-201ENST00000611501 352 ntBASIC23.21■■□□□ 1.31
KDM4AO75164 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KDM4AO75164 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.21■■□□□ 1.31
KDM4AO75164 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
KDM4AO75164 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KDM4AO75164 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KDM4AO75164 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KDM4AO75164 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KDM4AO75164 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KDM4AO75164 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.21■■□□□ 1.31
KDM4AO75164 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
KDM4AO75164 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
KDM4AO75164 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KDM4AO75164 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KDM4AO75164 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.2■■□□□ 1.3
KDM4AO75164 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.2■■□□□ 1.3
KDM4AO75164 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.2■■□□□ 1.3
KDM4AO75164 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
KDM4AO75164 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC23.2■■□□□ 1.3
KDM4AO75164 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.2■■□□□ 1.3
KDM4AO75164 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KDM4AO75164 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.2■■□□□ 1.3
KDM4AO75164 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
KDM4AO75164 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
KDM4AO75164 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms