Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.6■□□□□ 0.41
ZIC3O60481 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
ZIC3O60481 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.6■□□□□ 0.41
ZIC3O60481 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.6■□□□□ 0.41
ZIC3O60481 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.6■□□□□ 0.41
ZIC3O60481 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.59■□□□□ 0.41
ZIC3O60481 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 KRT17P2-201ENST00000300992 1314 ntBASIC17.59■□□□□ 0.41
ZIC3O60481 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ZIC3O60481 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.59■□□□□ 0.41
ZIC3O60481 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.59■□□□□ 0.41
ZIC3O60481 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.59■□□□□ 0.41
ZIC3O60481 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
ZIC3O60481 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
ZIC3O60481 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.59■□□□□ 0.41
ZIC3O60481 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ZIC3O60481 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZIC3O60481 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZIC3O60481 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ZIC3O60481 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZIC3O60481 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.58■□□□□ 0.41
ZIC3O60481 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZIC3O60481 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZIC3O60481 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.58■□□□□ 0.4
ZIC3O60481 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
ZIC3O60481 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.58■□□□□ 0.4
ZIC3O60481 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZIC3O60481 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZIC3O60481 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.58■□□□□ 0.4
ZIC3O60481 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.58■□□□□ 0.4
ZIC3O60481 MIR4785-201ENST00000585005 73 ntBASIC17.58■□□□□ 0.4
ZIC3O60481 AC026471.5-201ENST00000615068 467 ntBASIC17.58■□□□□ 0.4
ZIC3O60481 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.58■□□□□ 0.4
ZIC3O60481 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.58■□□□□ 0.4
ZIC3O60481 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZIC3O60481 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.58■□□□□ 0.4
ZIC3O60481 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.58■□□□□ 0.4
ZIC3O60481 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZIC3O60481 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
ZIC3O60481 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.57■□□□□ 0.4
ZIC3O60481 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.57■□□□□ 0.4
ZIC3O60481 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZIC3O60481 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.57■□□□□ 0.4
ZIC3O60481 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.57■□□□□ 0.4
ZIC3O60481 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.57■□□□□ 0.4
ZIC3O60481 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 AC004980.1-204ENST00000429707 299 ntBASIC17.57■□□□□ 0.4
ZIC3O60481 AL355355.2-201ENST00000442321 338 ntBASIC17.57■□□□□ 0.4
ZIC3O60481 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZIC3O60481 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 NUDT16P1-203ENST00000513809 620 ntBASIC17.57■□□□□ 0.4
ZIC3O60481 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 AP003071.4-201ENST00000562276 1284 ntBASIC17.57■□□□□ 0.4
ZIC3O60481 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.57■□□□□ 0.4
ZIC3O60481 AC131212.4-201ENST00000623606 975 ntBASIC17.57■□□□□ 0.4
ZIC3O60481 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.57■□□□□ 0.4
ZIC3O60481 AL031985.4-201ENST00000642138 673 ntBASIC17.57■□□□□ 0.4
ZIC3O60481 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZIC3O60481 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.57■□□□□ 0.4
ZIC3O60481 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZIC3O60481 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.57■□□□□ 0.4
ZIC3O60481 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
ZIC3O60481 TREX1-205ENST00000625293 1783 ntBASIC17.56■□□□□ 0.4
ZIC3O60481 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZIC3O60481 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZIC3O60481 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms