Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CEP290O15078 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.23■□□□□ 0.99
CEP290O15078 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.23■□□□□ 0.99
CEP290O15078 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CEP290O15078 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.23■□□□□ 0.99
CEP290O15078 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CEP290O15078 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CEP290O15078 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.23■□□□□ 0.99
CEP290O15078 AC116351.2-201ENST00000606540 1585 ntBASIC21.23■□□□□ 0.99
CEP290O15078 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CEP290O15078 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CEP290O15078 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CEP290O15078 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CEP290O15078 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CEP290O15078 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CEP290O15078 DRAXINP1-201ENST00000437611 948 ntBASIC21.22■□□□□ 0.99
CEP290O15078 AP002414.4-201ENST00000589764 1148 ntBASIC21.22■□□□□ 0.99
CEP290O15078 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CEP290O15078 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
CEP290O15078 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.22■□□□□ 0.99
CEP290O15078 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.22■□□□□ 0.99
CEP290O15078 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CEP290O15078 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CEP290O15078 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CEP290O15078 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CEP290O15078 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CEP290O15078 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CEP290O15078 TERC-201ENST00000602385 541 ntBASIC21.22■□□□□ 0.99
CEP290O15078 MIR2861-201ENST00000636310 90 ntBASIC21.22■□□□□ 0.99
CEP290O15078 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CEP290O15078 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CEP290O15078 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.22■□□□□ 0.99
CEP290O15078 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
CEP290O15078 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.21■□□□□ 0.99
CEP290O15078 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CEP290O15078 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CEP290O15078 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.21■□□□□ 0.99
CEP290O15078 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.21■□□□□ 0.99
CEP290O15078 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.21■□□□□ 0.99
CEP290O15078 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.21■□□□□ 0.99
CEP290O15078 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.21■□□□□ 0.99
CEP290O15078 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CEP290O15078 LINC00167-201ENST00000530583 1419 ntBASIC21.21■□□□□ 0.99
CEP290O15078 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CEP290O15078 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CEP290O15078 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.21■□□□□ 0.99
CEP290O15078 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CEP290O15078 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CEP290O15078 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.21■□□□□ 0.99
CEP290O15078 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CEP290O15078 MIR564-202ENST00000385049 94 ntBASIC21.21■□□□□ 0.99
CEP290O15078 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.21■□□□□ 0.99
CEP290O15078 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
CEP290O15078 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CEP290O15078 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CEP290O15078 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CEP290O15078 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CEP290O15078 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
CEP290O15078 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CEP290O15078 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CEP290O15078 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
CEP290O15078 HLA-F-220ENST00000434407 884 ntBASIC21.2■□□□□ 0.98
CEP290O15078 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CEP290O15078 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.2■□□□□ 0.98
CEP290O15078 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.2■□□□□ 0.98
CEP290O15078 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CEP290O15078 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CEP290O15078 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CEP290O15078 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CEP290O15078 KRT18P67-201ENST00000432816 1264 ntBASIC21.2■□□□□ 0.98
CEP290O15078 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.2■□□□□ 0.98
CEP290O15078 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.2■□□□□ 0.98
CEP290O15078 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.2■□□□□ 0.98
CEP290O15078 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.2■□□□□ 0.98
CEP290O15078 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.2■□□□□ 0.98
CEP290O15078 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CEP290O15078 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CEP290O15078 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CEP290O15078 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CEP290O15078 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CEP290O15078 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.19■□□□□ 0.98
CEP290O15078 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
CEP290O15078 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CEP290O15078 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CEP290O15078 AC055717.3-201ENST00000622967 595 ntBASIC21.19■□□□□ 0.98
CEP290O15078 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CEP290O15078 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CEP290O15078 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CEP290O15078 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CEP290O15078 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CEP290O15078 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CEP290O15078 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.19■□□□□ 0.98
CEP290O15078 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CEP290O15078 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CEP290O15078 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CEP290O15078 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CEP290O15078 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.19■□□□□ 0.98
CEP290O15078 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CEP290O15078 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.18■□□□□ 0.98
CEP290O15078 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms