Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1AO00322 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
UPK1AO00322 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1AO00322 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1AO00322 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1AO00322 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1AO00322 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1AO00322 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1AO00322 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.5■□□□□ 0.55
UPK1AO00322 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.5■□□□□ 0.55
UPK1AO00322 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1AO00322 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.5■□□□□ 0.55
UPK1AO00322 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.5■□□□□ 0.55
UPK1AO00322 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
UPK1AO00322 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.5■□□□□ 0.55
UPK1AO00322 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.5■□□□□ 0.55
UPK1AO00322 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.5■□□□□ 0.55
UPK1AO00322 AC006557.6-201ENST00000623071 864 ntBASIC18.5■□□□□ 0.55
UPK1AO00322 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
UPK1AO00322 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
UPK1AO00322 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
UPK1AO00322 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.5■□□□□ 0.55
UPK1AO00322 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1AO00322 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1AO00322 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1AO00322 LETM1P2-201ENST00000597330 2178 ntBASIC18.49■□□□□ 0.55
UPK1AO00322 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.49■□□□□ 0.55
UPK1AO00322 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1AO00322 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1AO00322 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1AO00322 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1AO00322 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1AO00322 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1AO00322 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1AO00322 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1AO00322 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.49■□□□□ 0.55
UPK1AO00322 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.49■□□□□ 0.55
UPK1AO00322 AC060766.5-201ENST00000590539 871 ntBASIC18.49■□□□□ 0.55
UPK1AO00322 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1AO00322 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.49■□□□□ 0.55
UPK1AO00322 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
UPK1AO00322 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
UPK1AO00322 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1AO00322 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.49■□□□□ 0.55
UPK1AO00322 LINC01465-201ENST00000408887 1940 ntBASIC18.49■□□□□ 0.55
UPK1AO00322 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1AO00322 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
UPK1AO00322 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1AO00322 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
UPK1AO00322 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.48■□□□□ 0.55
UPK1AO00322 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.48■□□□□ 0.55
UPK1AO00322 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1AO00322 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1AO00322 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1AO00322 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.48■□□□□ 0.55
UPK1AO00322 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.48■□□□□ 0.55
UPK1AO00322 PNMA6B-201ENST00000538162 1200 ntBASIC18.48■□□□□ 0.55
UPK1AO00322 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.48■□□□□ 0.55
UPK1AO00322 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1AO00322 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
UPK1AO00322 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
UPK1AO00322 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1AO00322 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.48■□□□□ 0.55
UPK1AO00322 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1AO00322 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1AO00322 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1AO00322 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.48■□□□□ 0.55
UPK1AO00322 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
UPK1AO00322 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
UPK1AO00322 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
UPK1AO00322 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1AO00322 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.48■□□□□ 0.55
UPK1AO00322 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UPK1AO00322 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.47■□□□□ 0.55
UPK1AO00322 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.47■□□□□ 0.55
UPK1AO00322 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.47■□□□□ 0.55
UPK1AO00322 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1AO00322 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.47■□□□□ 0.55
UPK1AO00322 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UPK1AO00322 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1AO00322 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
UPK1AO00322 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
UPK1AO00322 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.47■□□□□ 0.55
UPK1AO00322 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1AO00322 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1AO00322 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1AO00322 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1AO00322 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UPK1AO00322 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.47■□□□□ 0.55
UPK1AO00322 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.47■□□□□ 0.55
UPK1AO00322 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
UPK1AO00322 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.47■□□□□ 0.55
UPK1AO00322 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.47■□□□□ 0.55
UPK1AO00322 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.47■□□□□ 0.55
UPK1AO00322 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.47■□□□□ 0.55
UPK1AO00322 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
UPK1AO00322 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.47■□□□□ 0.55
UPK1AO00322 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1AO00322 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.47■□□□□ 0.55
UPK1AO00322 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms