Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.71■□□□□ 0.75
AP3B1O00203 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.71■□□□□ 0.75
AP3B1O00203 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
AP3B1O00203 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.7■□□□□ 0.74
AP3B1O00203 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3B1O00203 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.7■□□□□ 0.74
AP3B1O00203 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3B1O00203 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3B1O00203 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3B1O00203 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP3B1O00203 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3B1O00203 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.7■□□□□ 0.74
AP3B1O00203 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.7■□□□□ 0.74
AP3B1O00203 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.7■□□□□ 0.74
AP3B1O00203 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
AP3B1O00203 AC092666.2-201ENST00000613287 246 ntBASIC19.7■□□□□ 0.74
AP3B1O00203 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3B1O00203 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
AP3B1O00203 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.7■□□□□ 0.74
AP3B1O00203 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
AP3B1O00203 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP3B1O00203 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
AP3B1O00203 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP3B1O00203 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
AP3B1O00203 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP3B1O00203 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3B1O00203 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
AP3B1O00203 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.69■□□□□ 0.74
AP3B1O00203 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.69■□□□□ 0.74
AP3B1O00203 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
AP3B1O00203 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
AP3B1O00203 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
AP3B1O00203 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.69■□□□□ 0.74
AP3B1O00203 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3B1O00203 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3B1O00203 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3B1O00203 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.69■□□□□ 0.74
AP3B1O00203 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.69■□□□□ 0.74
AP3B1O00203 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.69■□□□□ 0.74
AP3B1O00203 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.69■□□□□ 0.74
AP3B1O00203 AC083880.1-201ENST00000608266 535 ntBASIC19.69■□□□□ 0.74
AP3B1O00203 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3B1O00203 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3B1O00203 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
AP3B1O00203 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
AP3B1O00203 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.69■□□□□ 0.74
AP3B1O00203 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
AP3B1O00203 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3B1O00203 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
AP3B1O00203 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.69■□□□□ 0.74
AP3B1O00203 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.68■□□□□ 0.74
AP3B1O00203 KRT8P8-201ENST00000434750 1448 ntBASIC19.68■□□□□ 0.74
AP3B1O00203 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP3B1O00203 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3B1O00203 ZNF815P-204ENST00000434898 1737 ntBASIC19.68■□□□□ 0.74
AP3B1O00203 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP3B1O00203 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3B1O00203 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3B1O00203 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3B1O00203 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3B1O00203 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
AP3B1O00203 AC142086.2-201ENST00000569753 217 ntBASIC19.68■□□□□ 0.74
AP3B1O00203 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.68■□□□□ 0.74
AP3B1O00203 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.68■□□□□ 0.74
AP3B1O00203 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3B1O00203 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.68■□□□□ 0.74
AP3B1O00203 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3B1O00203 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3B1O00203 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3B1O00203 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3B1O00203 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP3B1O00203 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.68■□□□□ 0.74
AP3B1O00203 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3B1O00203 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3B1O00203 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
AP3B1O00203 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3B1O00203 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3B1O00203 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.67■□□□□ 0.74
AP3B1O00203 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.67■□□□□ 0.74
AP3B1O00203 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.67■□□□□ 0.74
AP3B1O00203 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP3B1O00203 AC008687.6-201ENST00000596318 630 ntBASIC19.67■□□□□ 0.74
AP3B1O00203 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.67■□□□□ 0.74
AP3B1O00203 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3B1O00203 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3B1O00203 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
AP3B1O00203 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
AP3B1O00203 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.67■□□□□ 0.74
AP3B1O00203 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3B1O00203 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
AP3B1O00203 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3B1O00203 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3B1O00203 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
AP3B1O00203 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3B1O00203 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3B1O00203 AC124283.5-201ENST00000624661 1809 ntBASIC19.67■□□□□ 0.74
AP3B1O00203 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3B1O00203 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
AP3B1O00203 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms