Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.22■□□□□ 0.19
RNF223E7ERA6 AL390728.6-201ENST00000566446 1246 ntBASIC16.22■□□□□ 0.19
RNF223E7ERA6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF223E7ERA6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF223E7ERA6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF223E7ERA6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF223E7ERA6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF223E7ERA6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF223E7ERA6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF223E7ERA6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF223E7ERA6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF223E7ERA6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF223E7ERA6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF223E7ERA6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF223E7ERA6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF223E7ERA6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF223E7ERA6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF223E7ERA6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF223E7ERA6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF223E7ERA6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF223E7ERA6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 BNIP3P41-202ENST00000616656 861 ntBASIC16.21■□□□□ 0.19
RNF223E7ERA6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF223E7ERA6 IER3-202ENST00000376377 1350 ntBASIC16.21■□□□□ 0.19
RNF223E7ERA6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
RNF223E7ERA6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.21■□□□□ 0.18
RNF223E7ERA6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RNF223E7ERA6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
RNF223E7ERA6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF223E7ERA6 AC092338.2-201ENST00000568827 1415 ntBASIC16.2■□□□□ 0.18
RNF223E7ERA6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF223E7ERA6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF223E7ERA6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF223E7ERA6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF223E7ERA6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF223E7ERA6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF223E7ERA6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF223E7ERA6 TSPY17P-201ENST00000450329 467 ntBASIC16.2■□□□□ 0.18
RNF223E7ERA6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RNF223E7ERA6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF223E7ERA6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.2■□□□□ 0.18
RNF223E7ERA6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.2■□□□□ 0.18
RNF223E7ERA6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.2■□□□□ 0.18
RNF223E7ERA6 AC140113.3-201ENST00000605663 199 ntBASIC16.2■□□□□ 0.18
RNF223E7ERA6 AL121956.5-201ENST00000625261 221 ntBASIC16.2■□□□□ 0.18
RNF223E7ERA6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF223E7ERA6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF223E7ERA6 RN7SL832P-201ENST00000607781 1756 ntBASIC16.2■□□□□ 0.18
RNF223E7ERA6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RNF223E7ERA6 AF106564.1-201ENST00000607058 2553 ntBASIC16.2■□□□□ 0.18
RNF223E7ERA6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RNF223E7ERA6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RNF223E7ERA6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 AC007375.3-201ENST00000600936 2314 ntBASIC16.19■□□□□ 0.18
RNF223E7ERA6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF223E7ERA6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF223E7ERA6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.19■□□□□ 0.18
RNF223E7ERA6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RNF223E7ERA6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF223E7ERA6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.19■□□□□ 0.18
RNF223E7ERA6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.19■□□□□ 0.18
RNF223E7ERA6 AL359075.1-203ENST00000462729 1002 ntBASIC16.19■□□□□ 0.18
RNF223E7ERA6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF223E7ERA6 FAM86EP-206ENST00000510506 987 ntBASIC16.19■□□□□ 0.18
RNF223E7ERA6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.19■□□□□ 0.18
RNF223E7ERA6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
RNF223E7ERA6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF223E7ERA6 AL031432.5-201ENST00000641059 760 ntBASIC16.19■□□□□ 0.18
RNF223E7ERA6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF223E7ERA6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF223E7ERA6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF223E7ERA6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RNF223E7ERA6 AC092720.2-201ENST00000602388 1665 ntBASIC16.18■□□□□ 0.18
RNF223E7ERA6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RNF223E7ERA6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF223E7ERA6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms