Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 MRPL3P1-201ENST00000400109 1033 ntBASIC18.69■□□□□ 0.58
CNOT1A5YKK6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 KRT18P31-201ENST00000506277 1292 ntBASIC18.69■□□□□ 0.58
CNOT1A5YKK6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 AP003041.3-201ENST00000527151 707 ntBASIC18.69■□□□□ 0.58
CNOT1A5YKK6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 AC005229.4-201ENST00000610085 2198 ntBASIC18.68■□□□□ 0.58
CNOT1A5YKK6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.68■□□□□ 0.58
CNOT1A5YKK6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.68■□□□□ 0.58
CNOT1A5YKK6 LINC01311-201ENST00000565162 1445 ntBASIC18.68■□□□□ 0.58
CNOT1A5YKK6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT1A5YKK6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT1A5YKK6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT1A5YKK6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.68■□□□□ 0.58
CNOT1A5YKK6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CNOT1A5YKK6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.68■□□□□ 0.58
CNOT1A5YKK6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT1A5YKK6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT1A5YKK6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.68■□□□□ 0.58
CNOT1A5YKK6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 AF228730.7-201ENST00000641842 219 ntBASIC18.67■□□□□ 0.58
CNOT1A5YKK6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 CHCHD2P8-201ENST00000429873 447 ntBASIC18.67■□□□□ 0.58
CNOT1A5YKK6 NUS1P1-201ENST00000446295 882 ntBASIC18.67■□□□□ 0.58
CNOT1A5YKK6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.67■□□□□ 0.58
CNOT1A5YKK6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT1A5YKK6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.66■□□□□ 0.58
CNOT1A5YKK6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT1A5YKK6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.65■□□□□ 0.58
CNOT1A5YKK6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CNOT1A5YKK6 AC242852.2-201ENST00000615738 1807 ntBASIC18.65■□□□□ 0.58
CNOT1A5YKK6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.65■□□□□ 0.58
CNOT1A5YKK6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT1A5YKK6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.65■□□□□ 0.58
CNOT1A5YKK6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT1A5YKK6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CNOT1A5YKK6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.65■□□□□ 0.58
CNOT1A5YKK6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CNOT1A5YKK6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT1A5YKK6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT1A5YKK6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CNOT1A5YKK6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CNOT1A5YKK6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
CNOT1A5YKK6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.64■□□□□ 0.58
CNOT1A5YKK6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.64■□□□□ 0.58
CNOT1A5YKK6 KRT16P4-201ENST00000453883 522 ntBASIC18.64■□□□□ 0.58
CNOT1A5YKK6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.58
CNOT1A5YKK6 AC022898.2-201ENST00000616822 1312 ntBASIC18.64■□□□□ 0.58
CNOT1A5YKK6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT1A5YKK6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT1A5YKK6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms