Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC26.54■■□□□ 1.84
SBNO1A3KN83 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC26.54■■□□□ 1.84
SBNO1A3KN83 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC26.54■■□□□ 1.84
SBNO1A3KN83 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SBNO1A3KN83 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SBNO1A3KN83 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
SBNO1A3KN83 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
SBNO1A3KN83 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SBNO1A3KN83 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SBNO1A3KN83 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SBNO1A3KN83 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SBNO1A3KN83 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC26.53■■□□□ 1.84
SBNO1A3KN83 ATP5G2P1-201ENST00000433580 426 ntBASIC26.53■■□□□ 1.84
SBNO1A3KN83 CKBP1-201ENST00000565489 1086 ntBASIC26.53■■□□□ 1.84
SBNO1A3KN83 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC26.53■■□□□ 1.84
SBNO1A3KN83 AL691432.3-201ENST00000621860 400 ntBASIC26.53■■□□□ 1.84
SBNO1A3KN83 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SBNO1A3KN83 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SBNO1A3KN83 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SBNO1A3KN83 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
SBNO1A3KN83 KRT8P45-201ENST00000414328 1447 ntBASIC26.52■■□□□ 1.84
SBNO1A3KN83 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC26.52■■□□□ 1.84
SBNO1A3KN83 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
SBNO1A3KN83 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SBNO1A3KN83 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC26.52■■□□□ 1.84
SBNO1A3KN83 ZNF444P1-201ENST00000559497 298 ntBASIC26.52■■□□□ 1.84
SBNO1A3KN83 AL160286.2-201ENST00000567150 934 ntBASIC26.52■■□□□ 1.84
SBNO1A3KN83 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC26.52■■□□□ 1.84
SBNO1A3KN83 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
SBNO1A3KN83 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC26.52■■□□□ 1.84
SBNO1A3KN83 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC26.52■■□□□ 1.84
SBNO1A3KN83 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
SBNO1A3KN83 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SBNO1A3KN83 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SBNO1A3KN83 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
SBNO1A3KN83 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC26.51■■□□□ 1.83
SBNO1A3KN83 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SBNO1A3KN83 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SBNO1A3KN83 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SBNO1A3KN83 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SBNO1A3KN83 AC112907.2-201ENST00000448639 330 ntBASIC26.51■■□□□ 1.83
SBNO1A3KN83 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SBNO1A3KN83 NME1-207ENST00000480143 964 ntTSL 2 BASIC26.51■■□□□ 1.83
SBNO1A3KN83 LY6E-213ENST00000522528 606 ntTSL 3 BASIC26.51■■□□□ 1.83
SBNO1A3KN83 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC26.51■■□□□ 1.83
SBNO1A3KN83 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC26.51■■□□□ 1.83
SBNO1A3KN83 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC26.51■■□□□ 1.83
SBNO1A3KN83 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC26.51■■□□□ 1.83
SBNO1A3KN83 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
SBNO1A3KN83 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
SBNO1A3KN83 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
SBNO1A3KN83 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
SBNO1A3KN83 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
SBNO1A3KN83 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
SBNO1A3KN83 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC26.5■■□□□ 1.83
SBNO1A3KN83 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC26.5■■□□□ 1.83
SBNO1A3KN83 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC26.5■■□□□ 1.83
SBNO1A3KN83 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC26.5■■□□□ 1.83
SBNO1A3KN83 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
SBNO1A3KN83 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC26.5■■□□□ 1.83
SBNO1A3KN83 AC012313.10-201ENST00000623509 926 ntBASIC26.5■■□□□ 1.83
SBNO1A3KN83 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SBNO1A3KN83 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SBNO1A3KN83 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
SBNO1A3KN83 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
SBNO1A3KN83 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
SBNO1A3KN83 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SBNO1A3KN83 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
SBNO1A3KN83 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
SBNO1A3KN83 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SBNO1A3KN83 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
SBNO1A3KN83 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
SBNO1A3KN83 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
SBNO1A3KN83 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SBNO1A3KN83 FXN-203ENST00000396366 922 ntTSL 2 BASIC26.49■■□□□ 1.83
SBNO1A3KN83 AP000523.1-201ENST00000398242 1049 ntBASIC26.49■■□□□ 1.83
SBNO1A3KN83 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC26.49■■□□□ 1.83
SBNO1A3KN83 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC26.49■■□□□ 1.83
SBNO1A3KN83 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC26.49■■□□□ 1.83
SBNO1A3KN83 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SBNO1A3KN83 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SBNO1A3KN83 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC26.49■■□□□ 1.83
SBNO1A3KN83 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC26.49■■□□□ 1.83
SBNO1A3KN83 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
SBNO1A3KN83 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC26.49■■□□□ 1.83
SBNO1A3KN83 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SBNO1A3KN83 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SBNO1A3KN83 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SBNO1A3KN83 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SBNO1A3KN83 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC26.48■■□□□ 1.83
SBNO1A3KN83 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC26.48■■□□□ 1.83
SBNO1A3KN83 STARP1-201ENST00000397973 869 ntBASIC26.48■■□□□ 1.83
SBNO1A3KN83 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SBNO1A3KN83 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC26.48■■□□□ 1.83
SBNO1A3KN83 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC26.48■■□□□ 1.83
SBNO1A3KN83 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
SBNO1A3KN83 NEK4P2-201ENST00000580004 1012 ntBASIC26.48■■□□□ 1.83
SBNO1A3KN83 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SBNO1A3KN83 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SBNO1A3KN83 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms