Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 BX119927.1-201ENST00000636596 1552 ntBASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 VENTXP5-201ENST00000523979 775 ntBASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC24.92■■□□□ 1.58
LOC102724428A0A0B4J2F2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
LOC102724428A0A0B4J2F2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
LOC102724428A0A0B4J2F2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
LOC102724428A0A0B4J2F2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
LOC102724428A0A0B4J2F2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LOC102724428A0A0B4J2F2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC24.9■■□□□ 1.58
LOC102724428A0A0B4J2F2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC24.9■■□□□ 1.58
LOC102724428A0A0B4J2F2 AC083849.1-201ENST00000615227 514 ntBASIC24.9■■□□□ 1.58
LOC102724428A0A0B4J2F2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.9■■□□□ 1.58
LOC102724428A0A0B4J2F2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
LOC102724428A0A0B4J2F2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC24.9■■□□□ 1.58
LOC102724428A0A0B4J2F2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
LOC102724428A0A0B4J2F2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
LOC102724428A0A0B4J2F2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC24.9■■□□□ 1.58
LOC102724428A0A0B4J2F2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
LOC102724428A0A0B4J2F2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.89■■□□□ 1.58
LOC102724428A0A0B4J2F2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
LOC102724428A0A0B4J2F2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
LOC102724428A0A0B4J2F2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.89■■□□□ 1.58
LOC102724428A0A0B4J2F2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
LOC102724428A0A0B4J2F2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.89■■□□□ 1.58
LOC102724428A0A0B4J2F2 AC112907.2-201ENST00000448639 330 ntBASIC24.89■■□□□ 1.58
LOC102724428A0A0B4J2F2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.89■■□□□ 1.58
LOC102724428A0A0B4J2F2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC24.89■■□□□ 1.58
LOC102724428A0A0B4J2F2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC24.89■■□□□ 1.58
LOC102724428A0A0B4J2F2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.58
LOC102724428A0A0B4J2F2 HYMAI.1-201ENST00000620949 238 ntBASIC24.89■■□□□ 1.58
LOC102724428A0A0B4J2F2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.89■■□□□ 1.57
LOC102724428A0A0B4J2F2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
LOC102724428A0A0B4J2F2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 FXN-203ENST00000396366 922 ntTSL 2 BASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC24.88■■□□□ 1.57
LOC102724428A0A0B4J2F2 AC079834.2-201ENST00000609776 1949 ntBASIC24.87■■□□□ 1.57
LOC102724428A0A0B4J2F2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.87■■□□□ 1.57
LOC102724428A0A0B4J2F2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC24.87■■□□□ 1.57
LOC102724428A0A0B4J2F2 AC133561.1-201ENST00000568600 2415 ntBASIC24.87■■□□□ 1.57
LOC102724428A0A0B4J2F2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LOC102724428A0A0B4J2F2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LOC102724428A0A0B4J2F2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 AC012676.1-201ENST00000574705 1949 ntBASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 AP001271.2-201ENST00000624018 1556 ntBASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC24.86■■□□□ 1.57
LOC102724428A0A0B4J2F2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms