Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 RAP2CP1-201ENST00000605103 478 ntBASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 TFP1-202ENST00000475455 1573 ntBASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV3A0A0B4J244 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 AL137784.2-201ENST00000607332 1000 ntBASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV3A0A0B4J244 AC124283.5-201ENST00000624661 1809 ntBASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 MIPEPP3-201ENST00000412105 444 ntBASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV3A0A0B4J244 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 DUSP5P2-201ENST00000426873 1033 ntBASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TRAV3A0A0B4J244 AC006557.6-201ENST00000623071 864 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms