Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV26-1A0A087WT03 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 KRT8P20-201ENST00000423953 1409 ntBASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 AC023632.3-201ENST00000521633 145 ntBASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV26-1A0A087WT03 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 AC018445.3-201ENST00000624177 1945 ntBASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 PTBP1P-201ENST00000554374 1601 ntBASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 SOX15-203ENST00000570788 1093 ntBASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 AC005829.2-201ENST00000571422 1056 ntBASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 AL031963.3-201ENST00000606441 850 ntBASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 AC006557.6-201ENST00000623071 864 ntBASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 KRT8P17-201ENST00000453110 1448 ntBASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV26-1A0A087WT03 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV26-1A0A087WT03 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms