Protein–RNA interactions for Protein: Q9CRA7

Atp5s, ATP synthase subunit s, mitochondrial, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp5sQ9CRA7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atp5sQ9CRA7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Atp5sQ9CRA7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Atp5sQ9CRA7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atp5sQ9CRA7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atp5sQ9CRA7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atp5sQ9CRA7 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.77■□□□□ 0.76
Atp5sQ9CRA7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atp5sQ9CRA7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Atp5sQ9CRA7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Atp5sQ9CRA7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.76■□□□□ 0.75
Atp5sQ9CRA7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Atp5sQ9CRA7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Atp5sQ9CRA7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Atp5sQ9CRA7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Atp5sQ9CRA7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atp5sQ9CRA7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Atp5sQ9CRA7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Atp5sQ9CRA7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Atp5sQ9CRA7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atp5sQ9CRA7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Atp5sQ9CRA7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atp5sQ9CRA7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atp5sQ9CRA7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.74■□□□□ 0.75
Atp5sQ9CRA7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp5sQ9CRA7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Atp5sQ9CRA7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp5sQ9CRA7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp5sQ9CRA7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Atp5sQ9CRA7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Atp5sQ9CRA7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp5sQ9CRA7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Atp5sQ9CRA7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp5sQ9CRA7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atp5sQ9CRA7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp5sQ9CRA7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp5sQ9CRA7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atp5sQ9CRA7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atp5sQ9CRA7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Atp5sQ9CRA7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.69■□□□□ 0.74
Atp5sQ9CRA7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atp5sQ9CRA7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atp5sQ9CRA7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Atp5sQ9CRA7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp5sQ9CRA7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp5sQ9CRA7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp5sQ9CRA7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Atp5sQ9CRA7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp5sQ9CRA7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Atp5sQ9CRA7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp5sQ9CRA7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp5sQ9CRA7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp5sQ9CRA7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atp5sQ9CRA7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.67■□□□□ 0.74
Atp5sQ9CRA7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp5sQ9CRA7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atp5sQ9CRA7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp5sQ9CRA7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atp5sQ9CRA7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.66■□□□□ 0.74
Atp5sQ9CRA7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Atp5sQ9CRA7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.65■□□□□ 0.74
Atp5sQ9CRA7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Atp5sQ9CRA7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp5sQ9CRA7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Atp5sQ9CRA7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp5sQ9CRA7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp5sQ9CRA7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp5sQ9CRA7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp5sQ9CRA7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Atp5sQ9CRA7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp5sQ9CRA7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Atp5sQ9CRA7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp5sQ9CRA7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp5sQ9CRA7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atp5sQ9CRA7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp5sQ9CRA7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp5sQ9CRA7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Atp5sQ9CRA7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atp5sQ9CRA7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atp5sQ9CRA7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp5sQ9CRA7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp5sQ9CRA7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Atp5sQ9CRA7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp5sQ9CRA7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp5sQ9CRA7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp5sQ9CRA7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp5sQ9CRA7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp5sQ9CRA7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atp5sQ9CRA7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atp5sQ9CRA7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atp5sQ9CRA7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Atp5sQ9CRA7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Atp5sQ9CRA7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Atp5sQ9CRA7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.58■□□□□ 0.72
Atp5sQ9CRA7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.58■□□□□ 0.72
Atp5sQ9CRA7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atp5sQ9CRA7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atp5sQ9CRA7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atp5sQ9CRA7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atp5sQ9CRA7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms