Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
KRTAP3-3Q9BYR6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC15.52■□□□□ 0.08
KRTAP3-3Q9BYR6 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC15.52■□□□□ 0.08
KRTAP3-3Q9BYR6 AC092451.2-201ENST00000538746 658 ntBASIC15.52■□□□□ 0.08
KRTAP3-3Q9BYR6 AC079416.3-201ENST00000624479 549 ntBASIC15.52■□□□□ 0.08
KRTAP3-3Q9BYR6 AC009039.2-201ENST00000624524 529 ntBASIC15.52■□□□□ 0.08
KRTAP3-3Q9BYR6 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRTAP3-3Q9BYR6 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC15.51■□□□□ 0.07
KRTAP3-3Q9BYR6 AL451086.1-201ENST00000605596 223 ntBASIC15.51■□□□□ 0.07
KRTAP3-3Q9BYR6 AC017076.1-201ENST00000607613 578 ntBASIC15.51■□□□□ 0.07
KRTAP3-3Q9BYR6 AL392048.1-201ENST00000613946 534 ntBASIC15.51■□□□□ 0.07
KRTAP3-3Q9BYR6 AC138907.10-201ENST00000623708 983 ntBASIC15.51■□□□□ 0.07
KRTAP3-3Q9BYR6 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC15.5■□□□□ 0.07
KRTAP3-3Q9BYR6 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC15.5■□□□□ 0.07
KRTAP3-3Q9BYR6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.5■□□□□ 0.07
KRTAP3-3Q9BYR6 AC097655.1-201ENST00000635075 318 ntBASIC15.5■□□□□ 0.07
KRTAP3-3Q9BYR6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRTAP3-3Q9BYR6 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
KRTAP3-3Q9BYR6 H3F3A-203ENST00000366815 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRTAP3-3Q9BYR6 AL355994.1-201ENST00000424379 260 ntBASIC15.49■□□□□ 0.07
KRTAP3-3Q9BYR6 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC15.49■□□□□ 0.07
KRTAP3-3Q9BYR6 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC15.49■□□□□ 0.07
KRTAP3-3Q9BYR6 MTND1P8-201ENST00000571424 950 ntBASIC15.49■□□□□ 0.07
KRTAP3-3Q9BYR6 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC15.49■□□□□ 0.07
KRTAP3-3Q9BYR6 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC15.49■□□□□ 0.07
KRTAP3-3Q9BYR6 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC15.49■□□□□ 0.07
KRTAP3-3Q9BYR6 AL117378.2-201ENST00000622916 1337 ntBASIC15.48■□□□□ 0.07
KRTAP3-3Q9BYR6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRTAP3-3Q9BYR6 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC15.48■□□□□ 0.07
KRTAP3-3Q9BYR6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRTAP3-3Q9BYR6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.48■□□□□ 0.07
KRTAP3-3Q9BYR6 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC15.48■□□□□ 0.07
KRTAP3-3Q9BYR6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRTAP3-3Q9BYR6 AC013410.2-201ENST00000422627 201 ntBASIC15.47■□□□□ 0.07
KRTAP3-3Q9BYR6 AC034187.1-201ENST00000437047 561 ntTSL 4 BASIC15.47■□□□□ 0.07
KRTAP3-3Q9BYR6 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC15.47■□□□□ 0.07
KRTAP3-3Q9BYR6 MTCYBP28-201ENST00000566728 1132 ntBASIC15.47■□□□□ 0.07
KRTAP3-3Q9BYR6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC15.47■□□□□ 0.07
KRTAP3-3Q9BYR6 AC024933.1-201ENST00000608472 348 ntBASIC15.47■□□□□ 0.07
KRTAP3-3Q9BYR6 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC15.46■□□□□ 0.07
KRTAP3-3Q9BYR6 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC15.46■□□□□ 0.07
KRTAP3-3Q9BYR6 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC15.46■□□□□ 0.07
KRTAP3-3Q9BYR6 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
KRTAP3-3Q9BYR6 RDM1-219ENST00000615378 542 ntTSL 3 BASIC15.46■□□□□ 0.07
KRTAP3-3Q9BYR6 RWDD4P1-201ENST00000488019 565 ntBASIC15.45■□□□□ 0.06
KRTAP3-3Q9BYR6 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
KRTAP3-3Q9BYR6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
KRTAP3-3Q9BYR6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRTAP3-3Q9BYR6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
KRTAP3-3Q9BYR6 MTND2P15-201ENST00000418575 892 ntBASIC15.44■□□□□ 0.06
KRTAP3-3Q9BYR6 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC15.44■□□□□ 0.06
KRTAP3-3Q9BYR6 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC15.44■□□□□ 0.06
KRTAP3-3Q9BYR6 AC097376.1-201ENST00000602907 997 ntBASIC15.44■□□□□ 0.06
KRTAP3-3Q9BYR6 AC108673.2-201ENST00000608909 565 ntBASIC15.44■□□□□ 0.06
KRTAP3-3Q9BYR6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC15.43■□□□□ 0.06
KRTAP3-3Q9BYR6 AC013469.1-201ENST00000426985 403 ntBASIC15.43■□□□□ 0.06
KRTAP3-3Q9BYR6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC15.43■□□□□ 0.06
KRTAP3-3Q9BYR6 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.43■□□□□ 0.06
KRTAP3-3Q9BYR6 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC15.43■□□□□ 0.06
KRTAP3-3Q9BYR6 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC15.43■□□□□ 0.06
KRTAP3-3Q9BYR6 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC15.43■□□□□ 0.06
KRTAP3-3Q9BYR6 ZNF885P-201ENST00000420174 1098 ntBASIC15.42■□□□□ 0.06
KRTAP3-3Q9BYR6 AC133552.4-201ENST00000576103 676 ntBASIC15.42■□□□□ 0.06
KRTAP3-3Q9BYR6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRTAP3-3Q9BYR6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC15.42■□□□□ 0.06
KRTAP3-3Q9BYR6 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRTAP3-3Q9BYR6 MTND1P26-201ENST00000440488 538 ntBASIC15.41■□□□□ 0.06
KRTAP3-3Q9BYR6 AC022395.1-201ENST00000451610 895 ntTSL 2 BASIC15.41■□□□□ 0.06
KRTAP3-3Q9BYR6 DEFT1P-201ENST00000453425 496 ntBASIC15.41■□□□□ 0.06
KRTAP3-3Q9BYR6 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC15.41■□□□□ 0.06
KRTAP3-3Q9BYR6 NRXN1-234ENST00000630656 837 ntTSL 5 BASIC15.41■□□□□ 0.06
KRTAP3-3Q9BYR6 MTCYBP15-201ENST00000433123 1127 ntBASIC15.4■□□□□ 0.06
KRTAP3-3Q9BYR6 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC15.4■□□□□ 0.06
KRTAP3-3Q9BYR6 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KRTAP3-3Q9BYR6 RN7SL48P-201ENST00000579283 293 ntBASIC15.4■□□□□ 0.06
KRTAP3-3Q9BYR6 AC083799.1-201ENST00000366451 910 ntBASIC15.39■□□□□ 0.05
KRTAP3-3Q9BYR6 RPS20P25-201ENST00000412447 352 ntBASIC15.39■□□□□ 0.05
KRTAP3-3Q9BYR6 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC15.39■□□□□ 0.05
KRTAP3-3Q9BYR6 AC114322.1-201ENST00000506771 926 ntBASIC15.39■□□□□ 0.05
KRTAP3-3Q9BYR6 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC15.39■□□□□ 0.05
KRTAP3-3Q9BYR6 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
KRTAP3-3Q9BYR6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRTAP3-3Q9BYR6 AC240504.1-201ENST00000395709 845 ntBASIC15.38■□□□□ 0.05
KRTAP3-3Q9BYR6 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC15.38■□□□□ 0.05
KRTAP3-3Q9BYR6 AC097487.1-201ENST00000514134 934 ntTSL 3 BASIC15.38■□□□□ 0.05
KRTAP3-3Q9BYR6 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC15.38■□□□□ 0.05
KRTAP3-3Q9BYR6 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
KRTAP3-3Q9BYR6 AC017099.1-201ENST00000448261 1028 ntBASIC15.37■□□□□ 0.05
KRTAP3-3Q9BYR6 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC15.37■□□□□ 0.05
KRTAP3-3Q9BYR6 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.37■□□□□ 0.05
KRTAP3-3Q9BYR6 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC15.37■□□□□ 0.05
KRTAP3-3Q9BYR6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KRTAP3-3Q9BYR6 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRTAP3-3Q9BYR6 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KRTAP3-3Q9BYR6 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRTAP3-3Q9BYR6 AL162385.1-201ENST00000451595 1202 ntTSL 2 BASIC15.36■□□□□ 0.05
KRTAP3-3Q9BYR6 AL022319.1-201ENST00000458183 1167 ntBASIC15.36■□□□□ 0.05
KRTAP3-3Q9BYR6 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KRTAP3-3Q9BYR6 AC106795.5-201ENST00000623288 454 ntBASIC15.36■□□□□ 0.05
KRTAP3-3Q9BYR6 MTCYBP11-201ENST00000447254 1109 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms