Protein–RNA interactions for Protein: Q99N28

Cadm3, Cell adhesion molecule 3, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cadm3Q99N28 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cadm3Q99N28 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cadm3Q99N28 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cadm3Q99N28 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21■□□□□ 0.95
Cadm3Q99N28 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cadm3Q99N28 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cadm3Q99N28 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Cadm3Q99N28 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cadm3Q99N28 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cadm3Q99N28 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cadm3Q99N28 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cadm3Q99N28 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cadm3Q99N28 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cadm3Q99N28 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cadm3Q99N28 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cadm3Q99N28 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.98■□□□□ 0.95
Cadm3Q99N28 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cadm3Q99N28 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cadm3Q99N28 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cadm3Q99N28 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cadm3Q99N28 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cadm3Q99N28 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cadm3Q99N28 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cadm3Q99N28 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cadm3Q99N28 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cadm3Q99N28 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cadm3Q99N28 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cadm3Q99N28 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cadm3Q99N28 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cadm3Q99N28 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cadm3Q99N28 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cadm3Q99N28 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cadm3Q99N28 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cadm3Q99N28 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.94■□□□□ 0.94
Cadm3Q99N28 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cadm3Q99N28 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cadm3Q99N28 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cadm3Q99N28 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cadm3Q99N28 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cadm3Q99N28 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cadm3Q99N28 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cadm3Q99N28 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cadm3Q99N28 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.93■□□□□ 0.94
Cadm3Q99N28 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cadm3Q99N28 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cadm3Q99N28 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Cadm3Q99N28 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cadm3Q99N28 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cadm3Q99N28 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cadm3Q99N28 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cadm3Q99N28 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cadm3Q99N28 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cadm3Q99N28 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cadm3Q99N28 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cadm3Q99N28 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cadm3Q99N28 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cadm3Q99N28 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cadm3Q99N28 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cadm3Q99N28 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.9■□□□□ 0.94
Cadm3Q99N28 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cadm3Q99N28 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cadm3Q99N28 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cadm3Q99N28 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cadm3Q99N28 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cadm3Q99N28 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cadm3Q99N28 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cadm3Q99N28 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cadm3Q99N28 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cadm3Q99N28 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cadm3Q99N28 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cadm3Q99N28 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.87■□□□□ 0.93
Cadm3Q99N28 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cadm3Q99N28 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cadm3Q99N28 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cadm3Q99N28 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cadm3Q99N28 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Cadm3Q99N28 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cadm3Q99N28 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cadm3Q99N28 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.85■□□□□ 0.93
Cadm3Q99N28 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cadm3Q99N28 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cadm3Q99N28 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cadm3Q99N28 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.84■□□□□ 0.93
Cadm3Q99N28 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cadm3Q99N28 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cadm3Q99N28 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cadm3Q99N28 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cadm3Q99N28 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cadm3Q99N28 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cadm3Q99N28 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cadm3Q99N28 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.82■□□□□ 0.92
Cadm3Q99N28 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.82■□□□□ 0.92
Cadm3Q99N28 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cadm3Q99N28 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cadm3Q99N28 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cadm3Q99N28 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.81■□□□□ 0.92
Cadm3Q99N28 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.8■□□□□ 0.92
Cadm3Q99N28 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cadm3Q99N28 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cadm3Q99N28 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms