Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.73■■□□□ 1.71
LYSMD1Q96S90 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
LYSMD1Q96S90 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LYSMD1Q96S90 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
LYSMD1Q96S90 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LYSMD1Q96S90 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.73■■□□□ 1.71
LYSMD1Q96S90 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.73■■□□□ 1.71
LYSMD1Q96S90 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LYSMD1Q96S90 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.72■■□□□ 1.71
LYSMD1Q96S90 DUX4L11-201ENST00000611504 1267 ntBASIC25.72■■□□□ 1.71
LYSMD1Q96S90 DUX4L12-201ENST00000614593 1267 ntBASIC25.72■■□□□ 1.71
LYSMD1Q96S90 DUX4L14-201ENST00000621227 1267 ntBASIC25.72■■□□□ 1.71
LYSMD1Q96S90 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
LYSMD1Q96S90 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LYSMD1Q96S90 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.71■■□□□ 1.71
LYSMD1Q96S90 MIR7108-201ENST00000614319 87 ntBASIC25.71■■□□□ 1.71
LYSMD1Q96S90 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.7■■□□□ 1.71
LYSMD1Q96S90 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.7■■□□□ 1.7
LYSMD1Q96S90 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
LYSMD1Q96S90 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LYSMD1Q96S90 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.7■■□□□ 1.7
LYSMD1Q96S90 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
LYSMD1Q96S90 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
LYSMD1Q96S90 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
LYSMD1Q96S90 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
LYSMD1Q96S90 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.68■■□□□ 1.7
LYSMD1Q96S90 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LYSMD1Q96S90 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LYSMD1Q96S90 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.67■■□□□ 1.7
LYSMD1Q96S90 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.67■■□□□ 1.7
LYSMD1Q96S90 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LYSMD1Q96S90 DUX4L13-201ENST00000554103 1267 ntBASIC25.67■■□□□ 1.7
LYSMD1Q96S90 DUX4L15-201ENST00000611059 1267 ntBASIC25.67■■□□□ 1.7
LYSMD1Q96S90 DUX4L23-201ENST00000615195 1269 ntBASIC25.67■■□□□ 1.7
LYSMD1Q96S90 DUX4L24-201ENST00000617576 1269 ntBASIC25.67■■□□□ 1.7
LYSMD1Q96S90 DUX4L22-201ENST00000618238 1269 ntBASIC25.67■■□□□ 1.7
LYSMD1Q96S90 DUX4L20-201ENST00000619712 1269 ntBASIC25.67■■□□□ 1.7
LYSMD1Q96S90 DUX4L21-201ENST00000622058 1269 ntBASIC25.67■■□□□ 1.7
LYSMD1Q96S90 DUX4L10-201ENST00000622460 1267 ntBASIC25.67■■□□□ 1.7
LYSMD1Q96S90 DUX4L25-201ENST00000624915 1269 ntBASIC25.67■■□□□ 1.7
LYSMD1Q96S90 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LYSMD1Q96S90 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LYSMD1Q96S90 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
LYSMD1Q96S90 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.65■■□□□ 1.7
LYSMD1Q96S90 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.65■■□□□ 1.7
LYSMD1Q96S90 AC139426.1-201ENST00000568218 2529 ntBASIC25.65■■□□□ 1.7
LYSMD1Q96S90 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.65■■□□□ 1.7
LYSMD1Q96S90 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.65■■□□□ 1.7
LYSMD1Q96S90 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LYSMD1Q96S90 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.64■■□□□ 1.7
LYSMD1Q96S90 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LYSMD1Q96S90 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LYSMD1Q96S90 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
LYSMD1Q96S90 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
LYSMD1Q96S90 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
LYSMD1Q96S90 AC100797.4-201ENST00000631653 1827 ntBASIC25.63■■□□□ 1.69
LYSMD1Q96S90 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.63■■□□□ 1.69
LYSMD1Q96S90 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.63■■□□□ 1.69
LYSMD1Q96S90 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LYSMD1Q96S90 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LYSMD1Q96S90 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LYSMD1Q96S90 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.62■■□□□ 1.69
LYSMD1Q96S90 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
LYSMD1Q96S90 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LYSMD1Q96S90 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LYSMD1Q96S90 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.61■■□□□ 1.69
LYSMD1Q96S90 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.6■■□□□ 1.69
LYSMD1Q96S90 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
LYSMD1Q96S90 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.6■■□□□ 1.69
LYSMD1Q96S90 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.6■■□□□ 1.69
LYSMD1Q96S90 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
LYSMD1Q96S90 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
LYSMD1Q96S90 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
LYSMD1Q96S90 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.59■■□□□ 1.69
LYSMD1Q96S90 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
LYSMD1Q96S90 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
LYSMD1Q96S90 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
LYSMD1Q96S90 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.57■■□□□ 1.68
LYSMD1Q96S90 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
LYSMD1Q96S90 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.57■■□□□ 1.68
LYSMD1Q96S90 CR559946.2-201ENST00000623684 991 ntBASIC25.57■■□□□ 1.68
LYSMD1Q96S90 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
LYSMD1Q96S90 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
LYSMD1Q96S90 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
LYSMD1Q96S90 MIR3648-2-201ENST00000581792 180 ntBASIC25.56■■□□□ 1.68
LYSMD1Q96S90 MIR3648-1-201ENST00000615959 180 ntBASIC25.56■■□□□ 1.68
LYSMD1Q96S90 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
LYSMD1Q96S90 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LYSMD1Q96S90 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LYSMD1Q96S90 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.55■■□□□ 1.68
LYSMD1Q96S90 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.55■■□□□ 1.68
LYSMD1Q96S90 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
LYSMD1Q96S90 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
LYSMD1Q96S90 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LYSMD1Q96S90 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.54■■□□□ 1.68
LYSMD1Q96S90 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
LYSMD1Q96S90 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
LYSMD1Q96S90 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
LYSMD1Q96S90 AC110285.7-201ENST00000624417 1536 ntBASIC25.53■■□□□ 1.68
LYSMD1Q96S90 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms