Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Shank2Q80Z38 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC31.7■■■□□ 2.66
Shank2Q80Z38 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
Shank2Q80Z38 Mir3960-201ENSMUST00000198213 73 ntBASIC31.69■■■□□ 2.66
Shank2Q80Z38 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Shank2Q80Z38 Gm5812-201ENSMUST00000061073 957 ntBASIC31.68■■■□□ 2.66
Shank2Q80Z38 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Shank2Q80Z38 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Shank2Q80Z38 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Shank2Q80Z38 Gm14523-201ENSMUST00000117260 558 ntBASIC31.66■■■□□ 2.66
Shank2Q80Z38 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC31.66■■■□□ 2.66
Shank2Q80Z38 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Shank2Q80Z38 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Shank2Q80Z38 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Shank2Q80Z38 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC31.63■■■□□ 2.65
Shank2Q80Z38 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Shank2Q80Z38 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Shank2Q80Z38 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
Shank2Q80Z38 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Shank2Q80Z38 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Shank2Q80Z38 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.62■■■□□ 2.65
Shank2Q80Z38 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Shank2Q80Z38 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Shank2Q80Z38 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Shank2Q80Z38 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Shank2Q80Z38 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC31.6■■■□□ 2.65
Shank2Q80Z38 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Shank2Q80Z38 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC31.59■■■□□ 2.65
Shank2Q80Z38 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Shank2Q80Z38 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Shank2Q80Z38 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Shank2Q80Z38 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Shank2Q80Z38 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Shank2Q80Z38 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
Shank2Q80Z38 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC31.53■■■□□ 2.64
Shank2Q80Z38 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Shank2Q80Z38 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
Shank2Q80Z38 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Shank2Q80Z38 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
Shank2Q80Z38 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Shank2Q80Z38 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Shank2Q80Z38 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Shank2Q80Z38 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.48■■■□□ 2.63
Shank2Q80Z38 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
Shank2Q80Z38 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Shank2Q80Z38 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Shank2Q80Z38 AC151971.4-201ENSMUST00000214717 704 ntBASIC31.47■■■□□ 2.63
Shank2Q80Z38 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
Shank2Q80Z38 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
Shank2Q80Z38 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Shank2Q80Z38 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
Shank2Q80Z38 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Shank2Q80Z38 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Shank2Q80Z38 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Shank2Q80Z38 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Shank2Q80Z38 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Shank2Q80Z38 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC31.43■■■□□ 2.62
Shank2Q80Z38 Gm5921-201ENSMUST00000075898 882 ntBASIC31.43■■■□□ 2.62
Shank2Q80Z38 Gm5067-201ENSMUST00000170449 1009 ntBASIC31.42■■■□□ 2.62
Shank2Q80Z38 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Shank2Q80Z38 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
Shank2Q80Z38 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Shank2Q80Z38 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Shank2Q80Z38 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Shank2Q80Z38 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC31.4■■■□□ 2.62
Shank2Q80Z38 Gm37136-201ENSMUST00000194368 194 ntBASIC31.4■■■□□ 2.62
Shank2Q80Z38 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Shank2Q80Z38 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Shank2Q80Z38 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.4■■■□□ 2.62
Shank2Q80Z38 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Shank2Q80Z38 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Shank2Q80Z38 Gm12818-201ENSMUST00000117562 1349 ntBASIC31.38■■■□□ 2.61
Shank2Q80Z38 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Shank2Q80Z38 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Shank2Q80Z38 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.36■■■□□ 2.61
Shank2Q80Z38 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC31.36■■■□□ 2.61
Shank2Q80Z38 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Shank2Q80Z38 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.36■■■□□ 2.61
Shank2Q80Z38 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Shank2Q80Z38 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Shank2Q80Z38 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
Shank2Q80Z38 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Shank2Q80Z38 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC31.34■■■□□ 2.61
Shank2Q80Z38 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Shank2Q80Z38 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Shank2Q80Z38 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Shank2Q80Z38 Gm10420-201ENSMUST00000121713 882 ntBASIC31.33■■■□□ 2.61
Shank2Q80Z38 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
Shank2Q80Z38 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Shank2Q80Z38 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Shank2Q80Z38 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Shank2Q80Z38 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Shank2Q80Z38 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Shank2Q80Z38 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC31.27■■■□□ 2.6
Shank2Q80Z38 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC31.26■■■□□ 2.59
Shank2Q80Z38 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Shank2Q80Z38 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Shank2Q80Z38 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Shank2Q80Z38 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Shank2Q80Z38 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms